2QSQ: N-terminal domain of carcinoembryonic antigen

Crystal structure of the N-terminal domain of carcinoembryonic antigen (CEA). Determined by X-ray diffraction at 1.95 Å resolution. Released 1 Jan 2008.

Method
X-ray diffraction
Resolution
1.95 Å
Organism
Homo sapiens
Chains
2
Atoms
2,043
Mol. weight
25.3 kDa
Released
1 Jan 2008

Explore 2QSQ in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

2QSQ contains 5 α-helices and 22 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 2 helices, 11 β-strands

ElementResiduesLengthSheet
β-strand3-751
β-strand10-1232
β-strand17-2261
β-strand28-3583
α-helix41-433
β-strand44-4963
β-strand54-5743
β-strand65-6731
β-strand73-7531
α-helix80-823
β-strand84-9293
β-strand98-10473
β-strand105-10732
Chain B: 3 helices, 11 β-strands
ElementResiduesLengthSheet
β-strand3-754
β-strand10-1235
β-strand17-2264
α-helix24-252
β-strand28-3586
α-helix41-433
β-strand44-4966
β-strand55-5736
β-strand65-6734
β-strand73-7534
α-helix80-823
β-strand84-9296
β-strand98-10476
β-strand105-10735

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Carcinoembryonic antigen-related cell adhesion molecule 5A, Bprotein111Homo sapiensP06731 (AlphaFold model)
Sequence of entity 1 (A, B), FASTA
>2QSQ_1 Carcinoembryonic antigen-related cell adhesion molecule 5 (chains A, B)
AKLTIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGP
AYSGREIIYPNASLLIQNIIQNDAGFYTLHVIKSDLVNEEATGQFRVYPEL

Primary citation

Binding of Dr adhesins of Escherichia coli to carcinoembryonic antigen triggers receptor dissociation. Korotkova, N., Yang, Y., Le Trong, I. et al. Mol Microbiol (2008) 67:420-434. DOI 10.1111/j.1365-2958.2007.06054.x · PubMed

Other PDB entries of the same protein (UniProt P06731 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

About this viewer

MolViewer shows 2QSQ directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.