3RY6: Ig gamma-1 chain C region

Complex of fcgammariia (CD32) and the FC of human IGG1. Determined by X-ray diffraction at 3.8 Å resolution. Released 31 Aug 2011.

Method
X-ray diffraction
Resolution
3.8 Å
Organism
Homo sapiens
Chains
3
Atoms
5,145
Mol. weight
73.3 kDa
Ligands
NAG
Released
31 Aug 2011

Explore 3RY6 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

3RY6 contains 5 α-helices and 37 β-strands across 3 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 4 helices, 9 β-strands

ElementResiduesLengthSheet
α-helix248-2503
β-strand347-34821
β-strand35111
α-helix355-3584
β-strand362-37091
β-strand379-38242
β-strand38812
β-strand391-39221
α-helix394-3963
β-strand39711
β-strand405-41391
α-helix414-4196
β-strand424-42742
Chain B: 0 helices, 16 β-strands
ElementResiduesLengthSheet
β-strand34413
β-strand348-34924
β-strand36315
β-strand368-37254
β-strand37313
β-strand379-38136
β-strand38217
β-strand38717
β-strand392-39328
β-strand404-40634
β-strand408-40928
β-strand41215
β-strand42319
β-strand425-42736
β-strand437-43826
β-strand44119
Chain C: 1 helix, 12 β-strands
ElementResiduesLengthSheet
β-strand43110
β-strand48110
β-strand91111
β-strand107-109312
β-strand112111
α-helix113-1153
β-strand118-119213
β-strand123-124214
β-strand130114
β-strand138-140312
β-strand153-154214
β-strand157-158213
β-strand161-162213

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Ig gamma-1 chain C regionA, Bprotein214Homo sapiensP01857 (AlphaFold model)
Low affinity immunoglobulin gamma Fc region receptor II-aCprotein167Homo sapiensP12318 (AlphaFold model)
Sequence of entity 1 (A, B), FASTA
>3RY6_1 Ig gamma-1 chain C region (chains A, B)
APELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTK
PREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYT
LPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLS
Sequence of entity 2 (C), FASTA
>3RY6_2 Low affinity immunoglobulin gamma Fc region receptor II-a (chains C)
KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDS
GEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQN
GKSQKFSRLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQ

Ligands and cofactors

IDNameFormulaCopies
NAG2-acetamido-2-deoxy-beta-D-glucopyranoseC8 H15 N O61

Water and common crystallization additives (GOL) are not listed.

Primary citation

Structural Basis for Fc{gamma}RIIa Recognition of Human IgG and Formation of Inflammatory Signaling Complexes. Ramsland, P.A., Farrugia, W., Bradford, T.M. et al. J Immunol (2011) 187:3208-3217. DOI 10.4049/jimmunol.1101467 · PubMed

Other PDB entries of the same protein (UniProt P01857 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

About this viewer

MolViewer shows 3RY6 directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.