Crystal structure of Syo1. Determined by X-ray diffraction at 2.1 Å resolution. Released 31 Oct 2012.
Explore 4GMO in 3D Show helices and sheets RCSB PDB PDBe
4GMO contains 41 α-helices and 4 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
| Element | Residues | Length | Sheet |
|---|---|---|---|
| α-helix | 26-31 | 6 | |
| α-helix | 32-36 | 5 | |
| α-helix | 37-43 | 7 | |
| α-helix | 50-61 | 12 | |
| α-helix | 65-73 | 9 | |
| α-helix | 76-79 | 4 | |
| α-helix | 80-84 | 5 | |
| α-helix | 90-106 | 17 | |
| α-helix | 109-117 | 9 | |
| α-helix | 120-136 | 17 | |
| β-strand | 138 | 1 | 1 |
| β-strand | 141 | 1 | 1 |
| α-helix | 142-144 | 3 | |
| α-helix | 147-170 | 24 | |
| α-helix | 172-179 | 8 | |
| α-helix | 182-194 | 13 | |
| α-helix | 199-213 | 15 | |
| α-helix | 217-224 | 8 | |
| α-helix | 231-240 | 10 | |
| α-helix | 246-260 | 15 | |
| β-strand | 263 | 1 | 2 |
| β-strand | 266 | 1 | 2 |
| α-helix | 269-271 | 3 | |
| α-helix | 274-276 | 3 | |
| α-helix | 278-285 | 8 | |
| α-helix | 302-318 | 17 | |
| α-helix | 320-324 | 5 | |
| α-helix | 412-416 | 5 | |
| α-helix | 417-421 | 5 | |
| α-helix | 422-429 | 8 | |
| α-helix | 431-433 | 3 | |
| α-helix | 436-457 | 22 | |
| α-helix | 467-480 | 14 | |
| α-helix | 481-485 | 5 | |
| α-helix | 486-489 | 4 | |
| α-helix | 496-513 | 18 | |
| α-helix | 514-516 | 3 | |
| α-helix | 523-534 | 12 | |
| α-helix | 555-566 | 12 | |
| α-helix | 573-588 | 16 | |
| α-helix | 595-608 | 14 | |
| α-helix | 615-616 | 2 | |
| α-helix | 617-622 | 6 | |
| α-helix | 626-642 | 17 | |
| α-helix | 650-672 | 23 |
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|---|---|---|---|---|
| Putative uncharacterized protein | A | protein | 684 | Chaetomium thermophilum var. thermophilum DSM 1495 | G0S5S6 (AlphaFold model) |
>4GMO_1 Putative uncharacterized protein (chains A) MGKTRRNRVRNRTDPIAKPVKPPTDPELAKLREDKILPVLKDLKSPDAKSRTTAAGAIAN IVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFCVHLYRLDV LTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVAT KQTILRLLFRLISADIAPQDIYEEAISCLTTLSEDNLKVGQAITDDQETHVYDVLLKLAT GTDPRAVMACGVLHNVFTSLQWMDHSPGKDGACDAILIPTLTRALEHVVPGGAKFNGDAR YANITLLALVTLASIGTDFQETLVKGNQGSRESPISAADEEWNGFDDADGDAMDVDQKSS SGEDQEEDYEEIDVKEDDEDDDDDSITSEMQADMERVVGADGTDDGDLEDLPTLRELIQT AVPQLIRLSNLPIDSDESLTIQSHALSALNNISWTISCLEFANGENANIHNAWYPTAKKI WRKTILPILEADSADLKLATQVTSLAWAVARVLHGETPTDGNPHRKFISLYHSSKQQAGG NSNSIEEPEDPFQGLGVKCIGVVGSLAHDPAPIEVNREVGVFLVTLLRQSNNVPPAEIVE ALNQLFDIYGDEELACDKEVFWKDGFLKHLEEFLPKMRTLTKGIDKRTQPELRTRADEAL LNLGRFVQYKKKHAPKGSHHHHHH
Synchronizing nuclear import of ribosomal proteins with ribosome assembly. Kressler, D., Bange, G., Ogawa, Y. et al. Science (2012) 338:666-671. DOI 10.1126/science.1226960 · PubMed
Other PDB entries of the same protein (UniProt G0S5S6 (AlphaFold model), which also has an AlphaFold model), best resolution first:
MolViewer shows 4GMO directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.