5Z8Q: SBDalpha domain of yeast Ssa1

Solution structure of the SBDalpha domain of yeast Ssa1. Determined by solution NMR. Released 26 Sept 2018.

Method
Solution NMR
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Chains
1
Atoms
756
Mol. weight
10.79 kDa
Released
26 Sept 2018

Explore 5Z8Q in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

5Z8Q contains 3 α-helices and 0 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 3 helices, 0 β-strands

ElementResiduesLengthSheet
α-helix2-2928
α-helix38-5720
α-helix63-8826

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Heat shock protein SSA1Aprotein101Saccharomyces cerevisiae (strain ATCC 204508 / S288c)P10591 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>5Z8Q_1 Heat shock protein SSA1 (chains A)
SKEEDEKESQRIASKNQLESIAYSLKNTISEAGDKLEQADKDTVTKKAEETISWLDSNTT
ASKEEFDDKLKELQDIANPIMSKLYQAGGAPGGAAGGAPGG

Primary citation

The C-terminal GGAP motif of Hsp70 mediates substrate recognition and stress response in yeast. Gong, W., Hu, W., Xu, L. et al. J Biol Chem (2018) 293:17663-17675. DOI 10.1074/jbc.RA118.002691 · PubMed

Other PDB entries of the same protein (UniProt P10591 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

About this viewer

MolViewer shows 5Z8Q directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.