6MOJ: Dimeric DARPin A_angle_R5 complex with EpoR

Dimeric DARPin A_angle_R5 complex with EpoR. Determined by X-ray diffraction at 2.43 Å resolution. Released 5 Jun 2019.

Method
X-ray diffraction
Resolution
2.43 Å
Organisms
synthetic construct, Homo sapiens
Chains
2
Atoms
3,366
Mol. weight
50.12 kDa
Ligands
TAR
Released
5 Jun 2019

Explore 6MOJ in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

6MOJ contains 24 α-helices and 18 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 14 helices, 0 β-strands

ElementResiduesLengthSheet
α-helix5-1410
α-helix18-269
α-helix41-488
α-helix51-599
α-helix74-818
α-helix84-929
α-helix107-1148
α-helix117-1259
α-helix140-1467
α-helix150-1578
α-helix173-1797
α-helix183-1908
α-helix206-2138
α-helix216-2249
Chain B: 10 helices, 18 β-strands
ElementResiduesLengthSheet
α-helix9-2113
β-strand27-2931
β-strand3012
β-strand37-4261
α-helix50-523
β-strand53-5973
α-helix63-642
β-strand65-6733
β-strand70-7341
β-strand79-8461
β-strand96-10273
β-strand107-11373
α-helix115-1173
β-strand119-12022
α-helix121-1244
β-strand125-13174
β-strand138-14364
α-helix144-1452
α-helix151-1533
β-strand154-16185
β-strand170-17455
β-strand180-18344
α-helix186-1872
β-strand191-200105
α-helix2011
β-strand207-20822
α-helix209-2157
β-strand216-21945

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Dimeric DARPin ACR5 (A_angle_R5)Aprotein231synthetic construct
Erythropoietin receptorBprotein229Homo sapiensP19235 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>6MOJ_1 Dimeric DARPin ACR5 (A_angle_R5) (chains A)
MGHHHHHHSDLGKKLLKAARAGQDDEVRILMANGADVNATDIWDATPLHLAALIGHLEIV
EVLLKNGADVNASDITGTTPLHLAATMGHKDIVKVLLEYGADVNAYDLNGATPLHLAARM
GHAKIVLLLLEQGADVNAQDAAGMTPLHLAAANGHAVIVALLLMHGADVNAKDAAGMTPL
HLAAANGHEEIVILLLAMGADVNAQDKFGKTAFDISIDNGNEELAKVLQDH
Sequence of entity 2 (B), FASTA
>6MOJ_2 Erythropoietin receptor (chains B)
FAGSADPKFESKAALLAARGPEELLCFTERLEDLVCFWEEAASAGVGPGQYSFSYQLEDE
PWKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLELRVTAASGAPRYHRVIHINEVVLLD
APVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEILEGRTECV
LSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLTPSDLDKEKAAA

Ligands and cofactors

IDNameFormulaCopies
TARD(-)-tartaric acidC4 H6 O63

Water and common crystallization additives (GOL) are not listed.

Primary citation

Topological control of cytokine receptor signaling induces differential effects in hematopoiesis. Mohan, K., Ueda, G., Kim, A.R. et al. Science (2019) 364. DOI 10.1126/science.aav7532 · PubMed

Other PDB entries of the same protein (UniProt P19235 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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