8A43: Human RNA polymerase I
Human RNA polymerase I. Determined by electron microscopy at 4.09 Å resolution. Released 31 Aug 2022.
- Method
- Electron microscopy
- Resolution
- 4.09 Å
- Organism
- Homo sapiens
- Chains
- 12
- Atoms
- 31,109
- Mol. weight
- 565.23 kDa
- Released
- 31 Aug 2022
Explore 8A43 in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
8A43 contains 165 α-helices and 199 β-strands across 12 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain A: 79 helices, 52 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 22-27 | 6 | |
| β-strand | 32 | 1 | 1 |
| β-strand | 35 | 1 | 2 |
| β-strand | 49 | 1 | 2 |
| α-helix | 53-55 | 3 | |
| β-strand | 80 | 1 | 1 |
| β-strand | 81 | 1 | 3 |
| β-strand | 87-88 | 2 | 4 |
| α-helix | 93-101 | 9 | |
| β-strand | 103 | 1 | 5 |
| β-strand | 110 | 1 | 5 |
| α-helix | 114-127 | 14 | |
| α-helix | 133-137 | 5 | |
| α-helix | 160-170 | 11 | |
| α-helix | 182-200 | 19 | |
| β-strand | 215-218 | 4 | 6 |
| β-strand | 222-225 | 4 | 6 |
| α-helix | 230-235 | 6 | |
| β-strand | 254-255 | 2 | 6 |
| α-helix | 256-257 | 2 | |
| α-helix | 258-279 | 22 | |
| α-helix | 294-296 | 3 | |
| β-strand | 298-299 | 2 | 4 |
| β-strand | 302 | 1 | 3 |
| α-helix | 303-305 | 3 | |
| α-helix | 311-313 | 3 | |
| β-strand | 315 | 1 | 7 |
| β-strand | 318 | 1 | 7 |
| α-helix | 324-345 | 22 | |
| α-helix | 384-402 | 19 | |
| α-helix | 413-415 | 3 | |
| α-helix | 427-430 | 4 | |
| β-strand | 440-444 | 5 | 8 |
| β-strand | 445-447 | 3 | 9 |
| β-strand | 455-458 | 4 | 8 |
| α-helix | 459 | 1 | |
| α-helix | 460-465 | 6 | |
| β-strand | 467-468 | 2 | 10 |
| β-strand | 471 | 1 | 11 |
| α-helix | 477-486 | 10 | |
| β-strand | 496-498 | 3 | 11 |
| β-strand | 504-506 | 3 | 11 |
| α-helix | 512-522 | 11 | |
| β-strand | 537-539 | 3 | 11 |
| β-strand | 540-541 | 2 | 10 |
| α-helix | 542 | 1 | |
| β-strand | 547-549 | 3 | 8 |
| α-helix | 555 | 1 | |
| α-helix | 558-560 | 3 | |
| β-strand | 563-568 | 6 | 8 |
| β-strand | 575-577 | 3 | 9 |
| α-helix | 580-584 | 5 | |
| β-strand | 593-597 | 5 | 8 |
| α-helix | 602-606 | 5 | |
| α-helix | 607-611 | 5 | |
| β-strand | 619-620 | 2 | 12 |
| β-strand | 625-626 | 2 | 12 |
| α-helix | 632-634 | 3 | |
| α-helix | 636-641 | 6 | |
| α-helix | 650-659 | 10 | |
| α-helix | 684-695 | 12 | |
| α-helix | 751-754 | 4 | |
| α-helix | 761-769 | 9 | |
| α-helix | 772-787 | 16 | |
| α-helix | 803 | 1 | |
| β-strand | 804 | 1 | 13 |
| α-helix | 805 | 1 | |
| α-helix | 808-816 | 9 | |
| α-helix | 820-822 | 3 | |
| α-helix | 823-831 | 9 | |
| α-helix | 842-851 | 10 | |
| α-helix | 856-869 | 14 | |
| α-helix | 873-876 | 4 | |
| β-strand | 885 | 1 | 13 |
| α-helix | 895-898 | 4 | |
| α-helix | 910-913 | 4 | |
| β-strand | 917-918 | 2 | 14 |
| β-strand | 921 | 1 | 15 |
| β-strand | 924 | 1 | 15 |
| α-helix | 925 | 1 | |
| α-helix | 927 | 1 | |
| α-helix | 945-947 | 3 | |
| β-strand | 950-951 | 2 | 14 |
| α-helix | 963-992 | 30 | |
| β-strand | 1000 | 1 | 16 |
| β-strand | 1001 | 1 | 17 |
| β-strand | 1007 | 1 | 17 |
| β-strand | 1008 | 1 | 18 |
| β-strand | 1014 | 1 | 18 |
| α-helix | 1029-1032 | 4 | |
| α-helix | 1037-1040 | 4 | |
| α-helix | 1044-1049 | 6 | |
| α-helix | 1064-1078 | 15 | |
| α-helix | 1090-1102 | 13 | |
| α-helix | 1115-1126 | 12 | |
| α-helix | 1129-1137 | 9 | |
| α-helix | 1141 | 1 | |
| α-helix | 1143-1145 | 3 | |
| α-helix | 1146-1149 | 4 | |
| α-helix | 1161-1179 | 19 | |
| α-helix | 1191-1203 | 13 | |
| α-helix | 1205-1206 | 2 | |
| β-strand | 1210 | 1 | 16 |
| α-helix | 1211-1225 | 15 | |
| α-helix | 1244-1248 | 5 | |
| α-helix | 1249-1254 | 6 | |
| β-strand | 1265-1267 | 3 | 19 |
| α-helix | 1268-1269 | 2 | |
| α-helix | 1275-1284 | 10 | |
| β-strand | 1287-1289 | 3 | 20 |
| β-strand | 1294-1300 | 7 | 21 |
| β-strand | 1314-1321 | 8 | 21 |
| α-helix | 1324-1331 | 8 | |
| α-helix | 1337-1361 | 25 | |
| α-helix | 1496-1508 | 13 | |
| β-strand | 1514-1516 | 3 | 21 |
| β-strand | 1524-1530 | 7 | 21 |
| α-helix | 1536-1537 | 2 | |
| α-helix | 1540-1548 | 9 | |
| β-strand | 1552-1555 | 4 | 20 |
| β-strand | 1563-1564 | 2 | 19 |
| β-strand | 1577-1579 | 3 | 19 |
| α-helix | 1585-1588 | 4 | |
| α-helix | 1607-1612 | 6 | |
| α-helix | 1615-1630 | 16 | |
| α-helix | 1641-1648 | 8 | |
| α-helix | 1662-1664 | 3 | |
| α-helix | 1668-1672 | 5 | |
| α-helix | 1677-1687 | 11 | |
| α-helix | 1696-1702 | 7 | |
| β-strand | 1710 | 1 | 22 |
Chain B: 47 helices, 67 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 5-7 | 3 | |
| α-helix | 34-37 | 4 | |
| α-helix | 40-48 | 9 | |
| α-helix | 49-53 | 5 | |
| α-helix | 54-56 | 3 | |
| α-helix | 62-63 | 2 | |
| β-strand | 76-83 | 8 | 23 |
| α-helix | 100-105 | 6 | |
| β-strand | 113-119 | 7 | 23 |
| β-strand | 129-133 | 5 | 23 |
| α-helix | 153-158 | 6 | |
| β-strand | 170-172 | 3 | 24 |
| β-strand | 175-179 | 5 | 24 |
| α-helix | 180-181 | 2 | |
| β-strand | 182-185 | 4 | 25 |
| β-strand | 191-192 | 2 | 26 |
| α-helix | 197-199 | 3 | |
| β-strand | 205 | 1 | 27 |
| β-strand | 210-211 | 2 | 26 |
| β-strand | 213-215 | 3 | 28 |
| β-strand | 221-223 | 3 | 28 |
| β-strand | 226 | 1 | 26 |
| β-strand | 229 | 1 | 27 |
| β-strand | 235-239 | 5 | 29 |
| β-strand | 244-248 | 5 | 29 |
| α-helix | 249-255 | 7 | |
| α-helix | 262-267 | 6 | |
| α-helix | 278-288 | 11 | |
| α-helix | 297-312 | 16 | |
| α-helix | 320-331 | 12 | |
| α-helix | 334-336 | 3 | |
| α-helix | 340-357 | 18 | |
| β-strand | 372-375 | 4 | 25 |
| α-helix | 377-405 | 29 | |
| α-helix | 416-419 | 4 | |
| α-helix | 427-435 | 9 | |
| β-strand | 454-456 | 3 | 24 |
| α-helix | 457-458 | 2 | |
| α-helix | 463-468 | 6 | |
| α-helix | 476-478 | 3 | |
| α-helix | 484-486 | 3 | |
| β-strand | 494 | 1 | 30 |
| β-strand | 497 | 1 | 30 |
| α-helix | 530-535 | 6 | |
| α-helix | 539 | 1 | |
| β-strand | 540 | 1 | 31 |
| α-helix | 541 | 1 | |
| β-strand | 554-557 | 4 | 31 |
| β-strand | 562-566 | 5 | 31 |
| α-helix | 571-583 | 13 | |
| β-strand | 594-598 | 5 | 32 |
| α-helix | 607-608 | 2 | |
| β-strand | 609-613 | 5 | 32 |
| β-strand | 620-625 | 6 | 33 |
| β-strand | 631-635 | 5 | 33 |
| α-helix | 636-639 | 4 | |
| α-helix | 648-650 | 3 | |
| β-strand | 658-659 | 2 | 33 |
| α-helix | 663-666 | 4 | |
| α-helix | 670-672 | 3 | |
| α-helix | 682-691 | 10 | |
| α-helix | 692-694 | 3 | |
| β-strand | 695 | 1 | 34 |
| β-strand | 710-714 | 5 | 35 |
| β-strand | 723 | 1 | 36 |
| α-helix | 725-727 | 3 | |
| α-helix | 732-734 | 3 | |
| β-strand | 739 | 1 | 37 |
| β-strand | 742-744 | 3 | 38 |
| β-strand | 757-760 | 4 | 38 |
| α-helix | 762-765 | 4 | |
| β-strand | 771-775 | 5 | 35 |
| β-strand | 779 | 1 | 39 |
| β-strand | 791 | 1 | 40 |
| α-helix | 813-814 | 2 | |
| β-strand | 818-819 | 2 | 41 |
| β-strand | 824-826 | 3 | 42 |
| β-strand | 829 | 1 | 40 |
| β-strand | 836 | 1 | 40 |
| β-strand | 839-840 | 2 | 42 |
| β-strand | 847-849 | 3 | 41 |
| β-strand | 854 | 1 | 39 |
| β-strand | 867 | 1 | 39 |
| β-strand | 871-872 | 2 | 41 |
| β-strand | 873-875 | 3 | 35 |
| β-strand | 883-884 | 2 | 43 |
| β-strand | 893-897 | 5 | 38 |
| β-strand | 904 | 1 | 44 |
| β-strand | 913-914 | 2 | 38 |
| α-helix | 917-919 | 3 | |
| α-helix | 927-941 | 15 | |
| α-helix | 944-945 | 2 | |
| β-strand | 946 | 1 | 36 |
| α-helix | 958-969 | 12 | |
| β-strand | 976-977 | 2 | 45 |
| β-strand | 980 | 1 | 44 |
| β-strand | 987 | 1 | 44 |
| β-strand | 992-993 | 2 | 45 |
| β-strand | 994-996 | 3 | 38 |
| β-strand | 999 | 1 | 37 |
| β-strand | 1000-1001 | 2 | 43 |
| β-strand | 1002 | 1 | 34 |
| β-strand | 1011-1013 | 3 | 8 |
| β-strand | 1018 | 1 | 46 |
| β-strand | 1025 | 1 | 46 |
| α-helix | 1039-1048 | 10 | |
| β-strand | 1050 | 1 | 22 |
| α-helix | 1052-1054 | 3 | |
| α-helix | 1055-1062 | 8 | |
| β-strand | 1066-1070 | 5 | 47 |
| β-strand | 1080 | 1 | 48 |
| β-strand | 1097 | 1 | 48 |
| β-strand | 1107-1111 | 5 | 47 |
| α-helix | 1114-1125 | 12 | |
Chain C: 11 helices, 20 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 42-46 | 5 | |
| β-strand | 52-55 | 4 | 49 |
| β-strand | 61 | 1 | 50 |
| β-strand | 62-64 | 3 | 49 |
| α-helix | 70-83 | 14 | |
| β-strand | 86-89 | 4 | 51 |
| β-strand | 91-94 | 4 | 52 |
| α-helix | 103-111 | 9 | |
| α-helix | 113-114 | 2 | |
| β-strand | 115 | 1 | 53 |
| α-helix | 119-121 | 3 | |
| α-helix | 124-126 | 3 | |
| β-strand | 140-143 | 4 | 52 |
| β-strand | 147 | 1 | 54 |
| α-helix | 159-162 | 4 | |
| β-strand | 164 | 1 | 54 |
| β-strand | 173-175 | 3 | 52 |
| α-helix | 181-184 | 4 | |
| β-strand | 192 | 1 | 53 |
| β-strand | 209-211 | 3 | 52 |
| β-strand | 214-217 | 4 | 51 |
| β-strand | 228-231 | 4 | 50 |
| α-helix | 235-236 | 2 | |
| β-strand | 237 | 1 | 55 |
| α-helix | 250-256 | 7 | |
| β-strand | 262-266 | 5 | 56 |
| β-strand | 271-275 | 5 | 56 |
| β-strand | 301 | 1 | 55 |
| β-strand | 307 | 1 | 49 |
| β-strand | 310-312 | 3 | 50 |
| α-helix | 318-343 | 26 | |
Chain E: 8 helices, 13 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 3-24 | 22 | |
| α-helix | 30-33 | 4 | |
| α-helix | 37-43 | 7 | |
| β-strand | 61-62 | 2 | 57 |
| β-strand | 71-72 | 2 | 57 |
| β-strand | 73-74 | 2 | 58 |
| β-strand | 81-82 | 2 | 59 |
| α-helix | 84-97 | 14 | |
| β-strand | 101-103 | 3 | 58 |
| β-strand | 106 | 1 | 60 |
| β-strand | 109-110 | 2 | 59 |
| α-helix | 112-121 | 10 | |
| β-strand | 126-128 | 3 | 58 |
| β-strand | 131 | 1 | 60 |
| β-strand | 148-150 | 3 | 61 |
| α-helix | 151-152 | 2 | |
| α-helix | 153-163 | 11 | |
| β-strand | 172-173 | 2 | 61 |
| α-helix | 178-183 | 6 | |
| β-strand | 190-193 | 4 | 61 |
| β-strand | 205-209 | 5 | 61 |
Chain F: 3 helices, 4 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 59-74 | 16 | |
| α-helix | 93-99 | 7 | |
| β-strand | 106 | 1 | 62 |
| β-strand | 109 | 1 | 63 |
| β-strand | 115 | 1 | 63 |
| β-strand | 118 | 1 | 62 |
| α-helix | 120-122 | 3 | |
Chain H: 1 helix, 12 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 4-14 | 11 | 64 |
| β-strand | 26-32 | 7 | 64 |
| β-strand | 38-43 | 6 | 64 |
| β-strand | 55-61 | 7 | 64 |
| β-strand | 65 | 1 | 65 |
| β-strand | 83 | 1 | 65 |
| α-helix | 84-87 | 4 | |
| β-strand | 90-92 | 3 | 64 |
| β-strand | 96-98 | 3 | 64 |
| β-strand | 112-118 | 7 | 64 |
| β-strand | 121-127 | 7 | 64 |
| β-strand | 139 | 1 | 64 |
| β-strand | 142-148 | 7 | 64 |
Chain I: 1 helix, 2 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 26-29 | 4 | |
| β-strand | 36 | 1 | 66 |
| β-strand | 45 | 1 | 66 |
Chain J: 5 helices, 2 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 2-4 | 3 | |
| β-strand | 6 | 1 | 67 |
| β-strand | 13 | 1 | 67 |
| α-helix | 17-26 | 10 | |
| α-helix | 31-37 | 7 | |
| α-helix | 43-46 | 4 | |
| α-helix | 60-62 | 3 | |
4 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| DNA-directed RNA polymerase I subunit RPA1 | A | protein | 1720 | Homo sapiens | O95602 (AlphaFold model) |
| DNA-directed RNA polymerase I subunit RPA2 | B | protein | 1135 | Homo sapiens | Q9H9Y6 (AlphaFold model) |
| DNA-directed RNA polymerases I and III subunit RPAC1 | C | protein | 346 | Homo sapiens | O15160 (AlphaFold model) |
| DNA-directed RNA polymerases I, II, and III subunit RPABC1 | E | protein | 210 | Homo sapiens | P19388 (AlphaFold model) |
| DNA-directed RNA polymerases I, II, and III subunit RPABC2 | F | protein | 127 | Homo sapiens | P61218 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC3 | H | protein | 150 | Homo sapiens | P52434 |
| DNA-directed RNA polymerase I subunit RPA12 | I | protein | 126 | Homo sapiens | Q9P1U0 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 | J | protein | 67 | Homo sapiens | P62875 |
| DNA-directed RNA polymerases I and III subunit RPAC2 | K | protein | 133 | Homo sapiens | P0DPB6 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC4 | L | protein | 58 | Homo sapiens | P53803 |
| DNA-directed RNA polymerase I subunit RPA49 | N | protein | 419 | Homo sapiens | Q9GZS1 |
| DNA-directed RNA polymerase I subunit RPA34 | M | protein | 510 | Homo sapiens | O15446 |
Sequence of entity 1 (A), FASTA
>8A43_1 DNA-directed RNA polymerase I subunit RPA1 (chains A)
MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERILNRFLEENPDPSASEIREELEQYTTEIVQNNLLGSQGAH
VKNVCESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQKDS
EPLGIEEAQIGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDGMESRFNPSVFFLD
FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPEEVATPTT
DEEKDSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMMDKYPGIRQI
LEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREHYMELVYRG
LTDKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKITGKAWVKET
PRSVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPQAVRAALNLPEAASYD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRADPKKALHHFRAIKKWQSKHP
NTLLRRGAFLSYSQKIQEAVKALKLESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAA
ACPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSLDRLRTLLQLKW
QRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFCMEEKQNKFQVYQLRFQ
FLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKNNKASAFRNVNTRRATQRDLDNA
GELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEN
DDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMER
RVQAVREIHPFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGIT
RCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRV
IEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQF
LKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPLR
Sequence of entity 2 (B), FASTA
>8A43_2 DNA-directed RNA polymerase I subunit RPA2 (chains B)
MDPGSRWRNLPSGPSLKHLTDPSYGIPREQQKAALQELTRAHVESFNYAVHEGLGLAVQA
IPPFEFAFKDERISFTILDAVISPPTVPKGTICKEANVYPAECRGRRSTYRGKLTADINW
AVNGISKGIIKQFLGYVPIMVKSKLCNLRNLPPQALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEDDSFLRNSVSQMLRIVMEEGCSTQKQV
LNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAKGE
CMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTSVSMNTDNLMRIF
TMGIDLTKPFEYLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASIPALLCNLGVT
PIDGAPHRSYSECYPVLLDGVMVGWVDKDLAPGIADSLRHFKVLREKRIPPWMEVVLIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLALGKEELIGTMEQIFMNVAIFEDEVFAGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPSMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKIKQGDSSLVFGIKPGDPRVLQKLDDDGLPFIGAKLQYGDPYYSYLNLNTGESFVMY
YKSKENCVVDNIKVCSNDTGSGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDR
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTLCSRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVV
Sequence of entity 3 (C), FASTA
>8A43_3 DNA-directed RNA polymerases I and III subunit RPAC1 (chains C)
MAASQAVEEMRSRVVLGEFGVRNVHTTDFPGNYSGYDDAWDQDRFEKNFRVDVVHMDENS
LEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHADPR
LFEYRNQGDEEGTEIDTLQFRLQVRCTRNPHAAKDSSDPNELYVNHKVYTRHMTWIPLGN
QADLFPEGTIRPVHDDILIAQLRPGQEIDLLMHCVKGIGKDHAKFSPVATASYRLLPDIT
LLEPVEGEAAEELSRCFSPGVIEVQEVQGKKVARVANPRLDTFSREIFRNEKLKKVVRLA
RVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLDELDAVQMD
Sequence of entity 4 (E), FASTA
>8A43_4 DNA-directed RNA polymerases I, II, and III subunit RPABC1 (chains E)
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQSGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
Sequence of entity 5 (F), FASTA
>8A43_5 DNA-directed RNA polymerases I, II, and III subunit RPABC2 (chains F)
MSDNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGV
DELIITD
Sequence of entity 6 (H), FASTA
>8A43_6 DNA-directed RNA polymerases I, II, and III subunit RPABC3 (chains H)
MAGILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVI
ASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGG
LLMRLQGDANNLHGFEVDSRVYLLMKKLAF
Sequence of entity 7 (I), FASTA
>8A43_7 DNA-directed RNA polymerase I subunit RPA12 (chains I)
MSVMDLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRDFEGKVVKTSVV
FHQLGTAMPMSVEEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKF
QEKEDS
Sequence of entity 8 (J), FASTA
>8A43_8 DNA-directed RNA polymerases I, II, and III subunit RPABC5 (chains J)
MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL
NYAPLEK
Sequence of entity 9 (K), FASTA
>8A43_9 DNA-directed RNA polymerases I and III subunit RPAC2 (chains K)
MEEDQELERKISGLKTSMAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIM
KNPEVEFCGYTTTHPSESKINLRIQTRGTLPAVEPFQRGLNELMNVCQHVLDKFEASIKD
YKDQKASRNESTF
Sequence of entity 10 (L), FASTA
>8A43_10 DNA-directed RNA polymerases I, II, and III subunit RPABC4 (chains L)
MDTQKDVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR
Sequence of entity 11 (N), FASTA
>8A43_11 DNA-directed RNA polymerase I subunit RPA49 (chains N)
MAAEVLPSARWQYCGAPDGSQRAVLVQFSNGKLQSPGNMRFTLYENKDSTNPRKRNQRIL
AAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMEVYDAELFNMQPLFSDVSVES
ELALESQTKTYREKMDSCIEAFGTTKQKRALNTRRMNRVGNESLNRAVAKAAETIIDTKG
VTALVSDAIHNDLQDDSLYLPPCYDDAAKPEDVYKFEDLLSPAEYEALQSPSEAFRNVTS
EEILKMIEENSHCTFVIEALKSLPSDVESRDRQARCIWFLDTLIKFRAHRVVKRKSALGP
GVPHIINTKLLKHFTCLTYNNGRLRNLISDSMKAKITAYVIILALHIHDFQIDLTVLQRD
LKLSEKRMMEIAKAMRLKISKRRVSVAAGSEEDHKLGTLSLPLPPAQTSDRLAKRRKIT
Sequence of entity 12 (M), FASTA
>8A43_12 DNA-directed RNA polymerase I subunit RPA34 (chains M)
MEEPQAGDAARFSCPPNFTAKPPASESPRFSLEALTGPDTELWLIQAPADFAPECFNGRH
VPLSGSQIVKGKLAGKRHRYRVLSSCPQAGEATLLAPSTEAGGGLTCASAPQGTLRILEG
PQQSLSGSPLQPIPASPPPQIPPGLRPRFCAFGGNPPVTGPRSALAPNLLTSGKKKKEMQ
VTEAPVTQEAVNGHGALEVDMALGSPEMDVRKKKKKKNQQLKEPEAAGPVGTEPTVETLE
PLGVLFPSTTKKRKKPKGKETFEPEDKTVKQEQINTEPLEDTVLSPTKKRKRQKGTEGME
PEEGVTVESQPQVKVEPLEEAIPLPPTKKRKKEKGQMAMMEPGTEAMEPVEPEMKPLESP
GGTMAPQQPEGAKPQAQAALAAPKKKTKKEKQQDATVEPETEVVGPELPDDLEPQAAPTS
TKKKKKKKERGHTVTEPIQPLEPELPGEGQPEARATPGSTKKRKKQSQESRMPETVPQEE
MPGPPLNSESGEEAPTGRDKKRKQQQQQPV
Primary citation
The human RNA polymerase I structure reveals an HMG-like docking domain specific to metazoans. Daiss, J.L., Pilsl, M., Straub, K. et al. Life Sci Alliance (2022) 5. DOI 10.26508/lsa.202201568 · PubMed
Other PDB entries of the same protein (UniProt O95602 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 7OB9 2.7 Å, Cryo-EM structure of human RNA Polymerase I in elongation state
- 7VBB 2.81 Å, Structure of the post state human RNA Polymerase I Elongation Complex
- 7VBA 2.89 Å, Structure of the pre state human RNA Polymerase I Elongation Complex
- 7VBC 3.01 Å, Back track state of human RNA Polymerase I Elongation Complex
- 7OBA 3.1 Å, Cryo-EM structure of human RNA Polymerase I in complex with RRN3
- 7OBB 3.3 Å, Cryo-EM structure of human RNA Polymerase I Open Complex
Browse structure collections
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