8Q7Z: G. gallus 80S non-rotated ribosome
Structure of the G. gallus 80S non-rotated ribosome. Determined by electron microscopy at 2.5 Å resolution. Released 28 Aug 2024.
- Method
- Electron microscopy
- Resolution
- 2.5 Å
- Organism
- Gallus gallus
- Chains
- 80
- Atoms
- 216,968
- Mol. weight
- 3605.86 kDa
- Ligands
- MG, ZN
- Released
- 28 Aug 2024
Explore 8Q7Z in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
8Q7Z contains 563 α-helices and 546 β-strands across 75 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain Aa: 12 helices, 12 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 24-27 | 4 | |
| β-strand | 28-34 | 7 | 131 |
| β-strand | 43-50 | 8 | 131 |
| α-helix | 51-52 | 2 | |
| β-strand | 53 | 1 | 132 |
| β-strand | 56 | 1 | 132 |
| α-helix | 58-62 | 5 | |
| β-strand | 66-70 | 5 | 131 |
| α-helix | 71-73 | 3 | |
| β-strand | 82-92 | 11 | 131 |
| β-strand | 95-105 | 11 | 131 |
| α-helix | 107-113 | 7 | |
| β-strand | 118 | 1 | 133 |
| β-strand | 120-128 | 9 | 131 |
| β-strand | 134-143 | 10 | 131 |
| α-helix | 144-146 | 3 | |
| β-strand | 154 | 1 | 133 |
| α-helix | 155-157 | 3 | |
| α-helix | 158-176 | 19 | |
| α-helix | 181-188 | 8 | |
| α-helix | 192-199 | 8 | |
| β-strand | 207-219 | 13 | 131 |
| α-helix | 221-223 | 3 | |
| α-helix | 225-232 | 8 | |
Chain AA: 3 helices, 6 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 12-17 | 6 | |
| β-strand | 32-36 | 5 | 139 |
| β-strand | 44-47 | 4 | 139 |
| β-strand | 54-55 | 2 | 140 |
| β-strand | 62-65 | 4 | 140 |
| α-helix | 71 | 1 | |
| β-strand | 72-73 | 2 | 140 |
| α-helix | 74 | 1 | |
| β-strand | 78-81 | 4 | 139 |
Chain Ab: 12 helices, 10 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 36-42 | 7 | |
| α-helix | 49-55 | 7 | |
| α-helix | 62-68 | 7 | |
| β-strand | 74-86 | 13 | 151 |
| β-strand | 91-102 | 12 | 151 |
| β-strand | 107-115 | 9 | 151 |
| α-helix | 118-131 | 14 | |
| β-strand | 134-135 | 2 | 151 |
| α-helix | 136-137 | 2 | |
| β-strand | 139 | 1 | 152 |
| β-strand | 150 | 1 | 152 |
| β-strand | 155-159 | 5 | 153 |
| β-strand | 162-167 | 6 | 153 |
| β-strand | 175-176 | 2 | 153 |
| α-helix | 179-187 | 9 | |
| β-strand | 193-198 | 6 | 153 |
| α-helix | 204-217 | 14 | |
| α-helix | 224-226 | 3 | |
| α-helix | 229-230 | 2 | |
| α-helix | 233-235 | 3 | |
| α-helix | 236-239 | 4 | |
| α-helix | 241-246 | 6 | |
Chain AB: 0 helices, 4 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 10-20 | 11 | 106 |
| β-strand | 28-34 | 7 | 106 |
| β-strand | 41-46 | 6 | 106 |
| β-strand | 55-58 | 4 | 106 |
Chain Ac: 10 helices, 9 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 7-28 | 22 | |
| β-strand | 34-40 | 7 | 175 |
| β-strand | 46-52 | 7 | 175 |
| α-helix | 56-59 | 4 | |
| α-helix | 64-77 | 14 | |
| α-helix | 79-80 | 2 | |
| β-strand | 84-90 | 7 | 175 |
| α-helix | 94-96 | 3 | |
| α-helix | 98-111 | 14 | |
| α-helix | 115-129 | 15 | |
| β-strand | 133-140 | 8 | 176 |
| β-strand | 148-155 | 8 | 176 |
| α-helix | 163-167 | 5 | |
| β-strand | 168-176 | 9 | 176 |
| β-strand | 181-189 | 9 | 176 |
| α-helix | 190-192 | 3 | |
| β-strand | 209-210 | 2 | 177 |
| α-helix | 211-214 | 4 | |
| β-strand | 224-226 | 3 | 115 |
Chain AC: 2 helices, 6 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 92-94 | 3 | |
| α-helix | 101-105 | 5 | |
| β-strand | 106-108 | 3 | 99 |
| β-strand | 114-116 | 3 | 99 |
| β-strand | 120 | 1 | 100 |
| β-strand | 131 | 1 | 100 |
| β-strand | 138 | 1 | 101 |
| β-strand | 149 | 1 | 101 |
Chain Ad: 10 helices, 24 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 10 | 1 | 164 |
| α-helix | 16-18 | 3 | |
| β-strand | 27 | 1 | 164 |
| α-helix | 30-32 | 3 | |
| β-strand | 42-43 | 2 | 165 |
| α-helix | 44-45 | 2 | |
| α-helix | 46-51 | 6 | |
| α-helix | 58-66 | 9 | |
| β-strand | 70-72 | 3 | 166 |
| β-strand | 75-76 | 2 | 166 |
| β-strand | 83-84 | 2 | 165 |
| β-strand | 89-92 | 4 | 166 |
| β-strand | 97-100 | 4 | 166 |
| β-strand | 102-103 | 2 | 167 |
| β-strand | 109-110 | 2 | 167 |
| β-strand | 113 | 1 | 166 |
| α-helix | 118-120 | 3 | |
| β-strand | 121-125 | 5 | 168 |
| β-strand | 126-131 | 6 | 169 |
| α-helix | 133-135 | 3 | |
| β-strand | 137-141 | 5 | 169 |
| β-strand | 146-148 | 3 | 169 |
| β-strand | 159-163 | 5 | 168 |
| β-strand | 169-173 | 5 | 168 |
| β-strand | 180-183 | 4 | 170 |
| β-strand | 192-199 | 8 | 170 |
| β-strand | 207-211 | 5 | 170 |
| β-strand | 217-221 | 5 | 170 |
| α-helix | 222-224 | 3 | |
| β-strand | 225-227 | 3 | 170 |
| β-strand | 229 | 1 | 171 |
| β-strand | 234 | 1 | 171 |
| α-helix | 244-247 | 4 | |
| α-helix | 248-262 | 15 | |
Chain AD: 5 helices, 0 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 85-89 | 5 | |
| α-helix | 94-97 | 4 | |
| α-helix | 99-102 | 4 | |
| α-helix | 105-116 | 12 | |
| α-helix | 119-121 | 3 | |
67 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| 28S rRNA | B5 | RNA | 4441 | Gallus gallus | |
| 5.8S rRNA | B8 | RNA | 157 | Gallus gallus | |
| 5S rRNA | B7 | RNA | 119 | Gallus gallus | |
| 60S ribosomal protein L41 | Az | protein | 25 | Gallus gallus | A0A087WNH4 (AlphaFold model) |
| 60S ribosomal protein L8 | BA | protein | 257 | Gallus gallus | F1NIX0 (AlphaFold model) |
| Ribosomal protein uL3 | BB | protein | 403 | Gallus gallus | Q5ZJZ2 (AlphaFold model) |
| 60S ribosomal protein L4 C-terminal domain-containing protein | BC | protein | 421 | Gallus gallus | Q5ZII1 (AlphaFold model) |
| Large ribosomal subunit protein uL18 | BD | protein | 297 | Gallus gallus | P22451 |
| 60S ribosomal protein L6 | BE | protein | 298 | Gallus gallus | Q8UWG7 |
| Large ribosomal subunit protein uL30 | BF | protein | 246 | Gallus gallus | Q5ZJ56 |
| Large ribosomal subunit protein eL8 | BG | protein | 266 | Gallus gallus | P32429 |
| 60S ribosomal protein L9 | BH | protein | 192 | Gallus gallus | A0A1D5NVI1 |
68 more molecules are not listed.
Sequence of entity 1 (B5), FASTA
>8Q7Z_1 28S rRNA (chains B5)
CGCGACCUCAGGUCAGACGUGGCGACCCGCUGAAUUUAAGCAUAUUAGUCAGCGGAGGAA
AAGAAACUAACGAGGAUUCCCUCAGUAACGGCGAGUGAAGAGGGAAGAGCCCAGCGCCGA
AUCCCCGCCCCGCGGUGGGGCGCGGGAGGUGUGGCGUACGGAAGCCCCCAUCCCCGGCGC
CGCUCUCGGGGGGCCCAAGUCCUUCUGAUCGAGGCCCAGCCCGCGGACGGUGUGAGGCCG
GUAGCGGCCCCCCGGCGCGCCGGGCCCGGGGCUUCUCGGAGUCGGGUUGCUUGGGAAUGC
AGCCCAAAGCGGGUGGUAAACUCCAUCUAAGGCUAAAUACCGGCACGAGACCGAUAGCCA
ACAAGUACCGUAAGGGAAAGUUGAAAAGAACUUUGAAGAGAGAGUUCAAGAGGGCGUGAA
ACCGUUAAGAGGUAAACGGGUGGGGUCCGCGCAGUCGGCCCGGAGGAUUCAACCCGGCGG
GCCAAGGUCGGCCGGCGCGGGCGCCGUCGGAUCCCCGCCUCCGCCUCCCCUCCGUCCCUC
CCCUUCGCCGGGGCGGGGCGGGCCCAGGGGGGGCGGGCGGGCCGGGGACCGCCGCCCGGC
CGGCGUCCGGCCCCCGUCGGGCGCAUUUCCUCCGCGGCGGUGCGCCGCGACCGGCUCCGG
GACGGCUGGGAAGGGCUGCCGGCGGGCAGGUGGCCCGGCGCCGCGCGAGCGGCCGCCGGG
UGUUAUAGCCGCCGGGCCCGGAUCGUCGCCGAAUCCCGGGGCCGAGGGAGAGGACCGCCG
CCGCGCCCUCCCCCGGAGGGGGCGGCCCCCCGGAGGGCCCCCCGCGGCCGGACCGGCGUC
GGGCCGGCCGCGCCGCGCGCGCGUCCGCGCCGCCGCCGUACGCCGCCGCUCGCUCUCUCU
CCGUUCCCCGCCCCGGGUCCGUCCCGGGGCGCGGGGGCGGGGGGGGUCGGGUGUCCGGCG
CGCGGCUCGGCGCGGCGCCGCGCGUGUGGCGCGCGCCUCCAGCCCGGCGCGGGCGAGGCC
GCGGGGGGCGCCGGGGGGGAACCUUCCCCCUUCUGUUCGGGCCGCCUCCGUUCCCGCGGG
GGCGGCCCGUUCGGGGGACGGGCCCGCCGGCCCCCGGCGCCGCUGUCCGACCGGGGCGGA
CUGCGCUCAGUGCGCCCCGACCGCGCGGCGCCGCCGGGCCGGGCUCGGGCCACGCCAGGG
CGCCCGGGGUCCGCGGCGACGUCGGCUACCCACCCGACCCGUCUUGAAACACGGACCAAG
GAGUCUAGCACGCGCGCGAGUCGGCGGCUCGCGCGAAAGCCCGCGGCGCAAUGAAGGUGA
GGGCCGGCGCGCGCCGGCUGAGGUGGGAUCCCGGGGCGGCAGGCCGGAAGGCCCCGGGCG
CACCACCGGCCCGUCUCGCCCGCCUCGCCGGGGAGGUGGAGCAUGAGCGCGCGUGCUAGG
ACCCGAAAGAUGGUGAACUAUGCCUGGGCAGGGCGAAGCCAGAGGAAACUCUGGUGGAGG
UCCGUAGCGGUCCUGACGUGCAAAUCGGUCGUCCGACCCGGGUAUAGGGGCGAAAGACUA
AUCGAACCAUCUAGUAGCUGGUUCCCUCCGAAGUUUCCCUCAGGAUAGCUGGCGCUCGGG
GCGGCGGUGCAGUUUUACCCGGUAAAGCGAAUGAUUAGAGGUCUUGGGGCCGAAACGAUC
UCAACCUAUUCUCAAACUUUCAAUGGGUAAGACGCCCGGCUCGCUGGCGUGGAGCCGGGC
CGUGGAAUGCGAGCGCUCAGUGGGCCACUUUUGGUAAGCAGAACUGGCGCUGCGGGAUGA
ACCGAACGCCGGGUUAAGGCGCCCGAUGCCGACGCUCAUCAGAGCCCAGAAAAGGUGUUG
GUUGAUCUAGACAGCAGGACGGUGGCCAUGGAAGUCGGAACCCGCUAAGGAGUGUGUAAC
AACUCACCUGCCGAAUCAACUAGCCCUGAAAAUGGAUGGCGCUGGAGCGUCGGGCCCAUA
CCCGGCCGUCGCCGGCGGUGCGGAGCCGCGGGGGCUACGCCGCGACGAGUAGGAGGGCCG
CUGCGGUGCGCCUGGAAGCCUGGGGCGCGGGCCCGGGUGGAGCCGCCGCAGGUGCAGAUC
UUGGUGGUAGUAGCAACUAUUCAAACGAGAGCUUUGAAGGCCGAAGUGGAGCAGGGUUCC
AUGUGAACAGCAGUUGAACAUGGGUCAGUCGGUCCUAAGCGAUAGGCGAGCGCCGUUCCG
AAGGGACGGGCGAUGGCCUCCGUUGCCCUCAGCCGAUCGAAAGGGAGUCGGGUUCAGAUC
CCCGAAUCCGGAGCGGCGGAGACGGGCGCCGCGAGGCGCCCAGUGCGGUAACGCAAGCGA
UCCCGGAGAAGCCGGCGGGAGCCCCGGGGAGAGUUCUCUUUUCUUUGUGAAGGGCCGGGC
GCCCUGGAACGGGUUCGCCCCGAGAGAGGGGCCCGCGCCUUGGAAAGCGUCGCGGUUCCG
GCGGCGUCCGGUGAGCUCUCGCUGGCCCGUGAAAAUCCGGGGGAGAGGGUGUAAAUCUCG
CGCCGGGCCGUACCCAUAUCCGCAGCAGGUCUCCAAGGUGAACAGCCUCUGGCAUGUUGG
ACCAAUGUAGGUAAGGGAAGUCGGCAAGCCGGAUCCGUAACUUCGGGAUAAGGAUUGGCU
CUAAGGGCUGGGUCGGUCGGGCUGGGGCGCGAAGCGGGGCUGGGCGCGCGCCGCGGCUGG
ACGAGGCGCCGCCCGCCCCCGCCCCCCCUUUCCCCGCUCCCGCUCGCCGGGGCGCCGGGG
GGGGGGGUCAGCGGGCGGCGCGGCGGCGGCGACUCUGGACGCGCGCCGGGCCCUUCCCGU
GGAUCGCCCCAGCUGCGGCGGGCGCCGCUCGCCCCCCUCCUUGCCCCUCCGCCCCCCCGC
UCCCGGCGCCCCUCCCGUCGGCCGUCGUCCCGGCCGCCCCCCGUCCCGAGCGCCCUCCCC
GCGAGGGCGCGAGGGGCGGCGGCGGCGGCCGCGGGCGCGGCGGCGGCGGGGGGGGGCCCG
CCGGCGGCGCCGGGCGGGGCGGUCCCGGGCGGGGGGGGUCUCCGGGCCGGCGCCCCGCCU
CGGCCGGCGCCUAGCAGCCGGCUUAGAACUGGUGCGGACCAGGGGAAUCCGACUGUUUAA
UUAAAACAAAGCAUCGCGAAGGCCCGCGGCGGGUGUUGACGCGAUGUGAUUUCUGCCCAG
UGCUCUGAAUGUCAAAGUGAAGAAAUUCAAUGAAGCGCGGGUAAACGGCGGGAGUAACUA
UGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUCUAAUUAGUGACGCGCAUGAAXGGAUG
AACGAGAUUCCCACUGUCCCUAUCUACUAUCCAGCGAAACCACAGCCAAGGGAACGGGCU
UGGCGGAAUCAGCGGGGAAAGAAGACCCUGUUGAGCUUGACUCUAGUCUGGCGCUGUGAA
GAGACAUGAGAGGUGUAGAAUAAGUGGGAGGCCCCGCGGUCGCGCGACCCGCGCCGCGGC
CCGGCCGCCGGUGAAAUACCACUACUCUGAUCGUUUUUUCACUUACCCGGUGAGGCGGGG
GGGCGAGCCCCGAGGGGCUCUCGCUUCUGGCGCCAAGCGCCCGGCGCGCGCCGGGCGCGA
CCCGCUCCGGGGACAGCGUCAGGUGGGGAGUUUGACUGGGGCGGUACACCUGUCAAAGCG
UAACGCAGGUGUCCUAAGGCGAGCUCAGGGAGGCCAGAAACCUCCCGUGGAGCAGAAGGG
CAAAAGCUCGCUUGAUCUUGAUUUUCAGUACGAAUACAGACCGUGAAAGCGGGGCCUCAC
GAUCCUUCUGACUUUUUGGGUUUUAAGCAGGAGGUGUCAGAAAAGUUACCACAGGGAUAA
CUGGCUUGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCU
CUUCCUAUCAUUGUGAAGCAGAAUUCACCAAGCGUUGGAUUGUUCACCCACUAAUAGGGA
ACGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACUGAUGAUGUGUU
GUUGCGCUAGUAAUCCUGCUCAGUACGAGAGGAACCGCAGGUUCAGACAUUUGGUGUAUG
UGCUUGGCUGAGGAGCCACUGGAGCGAGGCUACCAUCUGUGGGAUUAUGACUGAACGCCU
CUAAGUCAGAAUCCCCCCUAAACGUAGCGAUACCGCAGCGCCGAGGCGCCUCGGUGGGCU
CGCGAUAGCCGGCCGCCGCCCCCCUCGGGCGGGCGGUCGGUGCGGAGCGCCGCUCGUGGU
CGGGACCGGAGCGCGGACAGAUGUGGCGCCGCCUCUCCCCCGCCGCGUACCGCAUGUUCG
UGGGGAACCCGGUGCUAAAUCAUUCGUAGACGACCUGAUUCUGGGUCGGGGUUUCGUACG
UAGCAGAGCAGCUCCCUCGCUGCGAUCUAUUGAGAGUCAGCCCUCGACACAAGCUUUUGU
C
Sequence of entity 2 (B8), FASTA
>8Q7Z_2 5.8S rRNA (chains B8)
CAACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAG
AAUUAAUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACUUGCGGCCCCG
GGUUCCUCCCGGGGCUACGCCUGCCUGAGCGUCGCUU
Sequence of entity 3 (B7), FASTA
>8Q7Z_3 5S rRNA (chains B7)
GCCUACGGCCAUCCCACCCUGGUAACGCCCGAUCUCGUCUGAUCUCGGAAGCUAAGCAGG
GUCGGGCCUGGUUAGUACUUGGAUGGGAGACCUCCUGGGAAUACCGGGUGCUGUAGGCU
Sequence of entity 4 (Az), FASTA
>8Q7Z_4 60S ribosomal protein L41 (chains Az)
MRAKWRKKRMRRLKRKRRKMRQRSK
Sequence of entity 5 (BA), FASTA
>8Q7Z_5 60S ribosomal protein L8 (chains BA)
MGRVIRGQRKGAGSVFRAHVKHRKGPAKLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK
IAFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP
GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGIVAGGGRIDKPIL
KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA
RRTGRLRGTKTVQEKEN
Sequence of entity 6 (BB), FASTA
>8Q7Z_6 Ribosomal protein uL3 (chains BB)
MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV
DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK
NWHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLPLRQKKSHL
MEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL
PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLIK
NNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRAL
EKIDLKFIDTTSKFGHGRFQTAEEKKSFMGPLKKDRIAKEEAA
Sequence of entity 7 (BC), FASTA
>8Q7Z_7 60S ribosomal protein L4 C-terminal domain-containing protein (chains BC)
MACARPLISVYSEKGEASGKNVTLPAVFKAPIRPDVVNFVHTNLRKNNRQPYAVSELAGH
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVTQK
RYAICSALAASALPALVMSKGHRIEEIPELPLVVEDKVESYKKTKEAVLLLKKLKAWNDI
KKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIRAFRNIPGITLLDVNKLNLLRL
APGGHVGRFCIWTESAFRKLDDLYGTWRKPATLKSDYNLPMHKMTNTDLGRILRSQEIQK
ALRAPKKKIHRRVLKKNPLKNLRVMIKLNPYAKTMRRNTILRHAQNQKLKEEKKAKAKAS
VTSKAKLSAKAQTKAKPASKTAGKAAAKGPAKAPAKAPAKSAAKAPAKSPAKAPAKGKAE
A
Sequence of entity 8 (BD), FASTA
>8Q7Z_8 Large ribosomal subunit protein uL18 (chains BD)
MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI
ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYE
GQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF
PGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNITPDGMEEMY
KKAHAAIRDNPVHEKKPKREVKKKRVNSTKMSLAQKKDRVAQKKASFLRAQERAADS
Sequence of entity 9 (BE), FASTA
>8Q7Z_9 60S ribosomal protein L6 (chains BE)
MAGEKKAGEKKAGEKKPAQKKVGEKKPADKKPVEKKAGQKKVREKIKKPKKYHASRNPVL
ARGIGKYSRSAMYARKALYKRKYTAPETKIEKKKKEKPRATIIKPVGGDKNGGSRVVKVR
KMPRYYPTEDVPRKLLSHGKKPFSQHKRRLRASITPGTVLILLTGRHRGKRVVFLKQLGT
GLLLVTGPLAVNRVPLRRAHQKFVIATSTKVDISGVKIPKHLTDAYFKKKKLRKPKHQEG
EIFDTEKEKYEITEQRKTDQKAVDSQILARIKKVPQLRGYLRSTFSLSNGVYPHKLVF
Sequence of entity 10 (BF), FASTA
>8Q7Z_10 Large ribosomal subunit protein uL30 (chains BF)
MADKEAKKVPSVPESLLKRRQAYAAAKAKRLKRLLAQKKFRKAQRKIIYERAKAYHKEYR
HMYRQEIRMARMARKAGNYYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTF
VKLNKASINMLRIVEPYIAWGYPNLKSVHDLIYKRGYGKINKKRIALTDNSLIRKRLGKL
GIICMEDVIHEIYTVGKNFKVVNNFLWPFKLSSPRGGMKKKTIHFVEGGDAGNREDQINR
LIRRMN
Sequence of entity 11 (BG), FASTA
>8Q7Z_11 Large ribosomal subunit protein eL8 (chains BG)
MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRY
IRLQRQRSILYKRLKVPPAINQFSQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEQ
KAAGKGDTPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVP
YCIIKSKARLGRLVHRKTCTCVAFTQVNPEDKGALAKLVEAVKTNYNDRYDEIRRHWGGN
VLGPKSVARIAKLEKAKAKELATKLG
Sequence of entity 12 (BH), FASTA
>8Q7Z_12 60S ribosomal protein L9 (chains BH)
MKTILSNQTVDIPEQVSVSLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKRRKLRVDKW
WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQDNGSLVEIRNFLGE
KYIRRVRMRPGVSCAVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY
VSEKGTVQQADE
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| MG | Magnesium ion | Mg | 494 |
| ZN | Zinc ion | Zn | 7 |
Primary citation
Cryo-EM structure of the inactive ribosome complex accumulated in chick embryo cells in cold-stress conditions. Nurullina, L., Terrosu, S., Myasnikov, A.G. et al. FEBS Lett (2024) 598:537-547. DOI 10.1002/1873-3468.14831 · PubMed
Other PDB entries of the same protein (UniProt A0A087WNH4 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 7O7Y 2.2 Å, Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a…
- 7OYD 2.3 Å, Cryo-EM structure of a rabbit 80S ribosome with zebrafish Dap1b
- 11IQ 2.4 Å, Rabbit 80S with eEF2,eIF5A and SERBP1
- 7O7Z 2.4 Å, Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a…
- 8Q87 2.4 Å, Structure of the G. gallus 80S rotated ribosome in complex with eEF2 and SERBP1
- 8SCB 2.5 Å, Terminating ribosome with SRI-41315
- 9MR4 2.65 Å, NAC: Ribosome nascent chain complex(Oxa1L)
- 9RHU 2.65 Å, Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A…
- 8RJB 2.69 Å, Structure of the rabbit 80S ribosome stalled on a 2-TMD rhodopsin intermediate in…
- 8VVQ 2.7 Å, Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from…
- 8RJD 2.79 Å, Structure of the rabbit 80S ribosome stalled on a 2-TMD rhodopsin intermediate in…
- 8B6C 2.79 Å, Cryo-EM structure of ribosome-Sec61 in complex with cyclotriazadisulfonamide derivative…
Browse structure collections
About this viewer
MolViewer shows 8Q7Z directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.