8RCH: Serine/threonine-protein kinase mTOR
CryoEM structure of mTORC1 with a paediatric kidney cancer-associated 1455-EWED-1458 duplication in mTOR, overall refinement. Determined by electron microscopy at 4.0 Å resolution. Released 11 Sept 2024.
- Method
- Electron microscopy
- Resolution
- 4.0 Å
- Organism
- Homo sapiens
- Chains
- 8
- Atoms
- 49,608
- Mol. weight
- 975.03 kDa
- Ligands
- MG, ANP
- Released
- 11 Sept 2024
Explore 8RCH in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
8RCH contains 352 α-helices and 133 β-strands across 6 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain A: 140 helices, 13 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 62-72 | 11 | |
| α-helix | 83-90 | 8 | |
| α-helix | 100-102 | 3 | |
| α-helix | 103-107 | 5 | |
| α-helix | 108-114 | 7 | |
| α-helix | 120-134 | 15 | |
| α-helix | 139-154 | 16 | |
| α-helix | 168-176 | 9 | |
| α-helix | 180-182 | 3 | |
| α-helix | 188-197 | 10 | |
| α-helix | 204-211 | 8 | |
| α-helix | 214-220 | 7 | |
| α-helix | 236-239 | 4 | |
| α-helix | 240-244 | 5 | |
| α-helix | 262-275 | 14 | |
| α-helix | 278-287 | 10 | |
| α-helix | 387-399 | 13 | |
| α-helix | 411-422 | 12 | |
| α-helix | 435-439 | 5 | |
| α-helix | 448-450 | 3 | |
| α-helix | 452-460 | 9 | |
| α-helix | 479-488 | 10 | |
| α-helix | 498-511 | 14 | |
| α-helix | 515-527 | 13 | |
| α-helix | 531-543 | 13 | |
| α-helix | 544-548 | 5 | |
| α-helix | 579-591 | 13 | |
| α-helix | 601-611 | 11 | |
| α-helix | 616-629 | 14 | |
| α-helix | 646-665 | 20 | |
| α-helix | 669-677 | 9 | |
| α-helix | 681-683 | 3 | |
| α-helix | 684-687 | 4 | |
| α-helix | 690-699 | 10 | |
| α-helix | 705-718 | 14 | |
| α-helix | 723-743 | 21 | |
| α-helix | 748-763 | 16 | |
| α-helix | 772-784 | 13 | |
| α-helix | 795-809 | 15 | |
| α-helix | 810-816 | 7 | |
| α-helix | 817-829 | 13 | |
| α-helix | 831-833 | 3 | |
| α-helix | 837-850 | 14 | |
| α-helix | 857-860 | 4 | |
| α-helix | 863-874 | 12 | |
| α-helix | 878-891 | 14 | |
| α-helix | 896-901 | 6 | |
| α-helix | 934-938 | 5 | |
| α-helix | 943-946 | 4 | |
| α-helix | 948-959 | 12 | |
| α-helix | 964-982 | 19 | |
| α-helix | 983-988 | 6 | |
| α-helix | 990-1003 | 14 | |
| α-helix | 1006-1023 | 18 | |
| α-helix | 1024-1030 | 7 | |
| α-helix | 1031-1040 | 10 | |
| α-helix | 1046-1062 | 17 | |
| α-helix | 1067-1069 | 3 | |
| α-helix | 1075-1082 | 8 | |
| α-helix | 1091-1103 | 13 | |
| α-helix | 1104-1109 | 6 | |
| α-helix | 1111-1123 | 13 | |
| α-helix | 1129-1133 | 5 | |
| α-helix | 1137-1143 | 7 | |
| α-helix | 1152-1163 | 12 | |
| α-helix | 1167-1169 | 3 | |
| α-helix | 1170-1184 | 15 | |
| α-helix | 1185-1188 | 4 | |
| α-helix | 1192-1199 | 8 | |
| α-helix | 1207-1218 | 12 | |
| α-helix | 1262-1269 | 8 | |
| α-helix | 1270-1273 | 4 | |
| α-helix | 1277-1293 | 17 | |
| α-helix | 1298-1310 | 13 | |
| α-helix | 1312-1328 | 17 | |
| α-helix | 1331-1347 | 17 | |
| α-helix | 1351-1366 | 16 | |
| α-helix | 1376-1379 | 4 | |
| α-helix | 1380-1389 | 10 | |
| α-helix | 1393-1406 | 14 | |
| α-helix | 1410-1422 | 13 | |
| α-helix | 1426-1439 | 14 | |
| α-helix | 1514-1520 | 7 | |
| α-helix | 1529-1532 | 4 | |
| α-helix | 1533-1535 | 3 | |
| α-helix | 1541-1547 | 7 | |
| α-helix | 1557-1578 | 22 | |
| α-helix | 1586-1607 | 22 | |
| α-helix | 1609-1625 | 17 | |
| α-helix | 1630-1640 | 11 | |
| α-helix | 1650-1658 | 9 | |
| α-helix | 1666-1677 | 12 | |
| α-helix | 1681-1684 | 4 | |
| α-helix | 1694-1705 | 12 | |
| α-helix | 1710-1730 | 21 | |
| α-helix | 1737-1762 | 26 | |
| α-helix | 1769-1782 | 14 | |
| α-helix | 1787-1812 | 26 | |
| α-helix | 1868-1893 | 26 | |
| α-helix | 1899-1912 | 14 | |
| α-helix | 1917-1926 | 10 | |
| α-helix | 1927-1929 | 3 | |
| α-helix | 1932-1935 | 4 | |
| α-helix | 1936-1938 | 3 | |
| α-helix | 1939-1943 | 5 | |
| α-helix | 1951-1967 | 17 | |
| α-helix | 1969-1980 | 12 | |
| α-helix | 1985-2002 | 18 | |
| α-helix | 2005-2020 | 16 | |
| α-helix | 2023-2035 | 13 | |
| α-helix | 2036-2041 | 6 | |
| α-helix | 2044-2060 | 17 | |
| α-helix | 2065-2070 | 6 | |
| α-helix | 2071-2075 | 5 | |
| α-helix | 2076-2091 | 16 | |
| α-helix | 2094-2114 | 21 | |
| β-strand | 2120-2122 | 3 | 1 |
| α-helix | 2123-2125 | 3 | |
| α-helix | 2128-2131 | 4 | |
| β-strand | 2136-2139 | 4 | 1 |
| α-helix | 2140 | 1 | |
| β-strand | 2141 | 1 | 2 |
| β-strand | 2143 | 1 | 2 |
| α-helix | 2150-2151 | 2 | |
| β-strand | 2152-2156 | 5 | 1 |
| β-strand | 2159-2162 | 4 | 1 |
| α-helix | 2163-2164 | 2 | |
| β-strand | 2170-2176 | 7 | 1 |
| β-strand | 2181-2188 | 8 | 1 |
| α-helix | 2193-2210 | 18 | |
| α-helix | 2213-2217 | 5 | |
| β-strand | 2228-2230 | 3 | 1 |
| β-strand | 2234-2236 | 3 | 1 |
| β-strand | 2243-2245 | 3 | 3 |
| α-helix | 2246-2256 | 11 | |
| α-helix | 2263-2271 | 9 | |
| α-helix | 2275-2277 | 3 | |
| α-helix | 2280-2292 | 13 | |
| α-helix | 2298-2305 | 8 | |
| α-helix | 2310-2334 | 25 | |
| α-helix | 2341-2343 | 3 | |
| β-strand | 2344-2347 | 4 | 3 |
| β-strand | 2353-2355 | 3 | 3 |
| α-helix | 2365-2367 | 3 | |
| α-helix | 2381-2386 | 6 | |
| α-helix | 2392-2396 | 5 | |
| α-helix | 2397-2409 | 13 | |
| α-helix | 2411-2423 | 13 | |
| α-helix | 2425-2428 | 4 | |
| α-helix | 2429-2433 | 5 | |
| α-helix | 2493-2508 | 16 | |
| α-helix | 2521-2532 | 12 | |
| α-helix | 2535-2540 | 6 | |
Chain B: 138 helices, 15 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 62-73 | 12 | |
| α-helix | 83-91 | 9 | |
| α-helix | 101-114 | 14 | |
| α-helix | 120-134 | 15 | |
| α-helix | 139-155 | 17 | |
| α-helix | 168-175 | 8 | |
| α-helix | 187-197 | 11 | |
| α-helix | 204-211 | 8 | |
| α-helix | 212-214 | 3 | |
| α-helix | 218-222 | 5 | |
| α-helix | 234-236 | 3 | |
| α-helix | 238-243 | 6 | |
| α-helix | 262-275 | 14 | |
| α-helix | 278-286 | 9 | |
| α-helix | 387-402 | 16 | |
| α-helix | 411-421 | 11 | |
| α-helix | 435-439 | 5 | |
| α-helix | 449-454 | 6 | |
| α-helix | 456-462 | 7 | |
| α-helix | 480-489 | 10 | |
| α-helix | 501-508 | 8 | |
| α-helix | 517-527 | 11 | |
| α-helix | 532-548 | 17 | |
| α-helix | 579-591 | 13 | |
| α-helix | 600-609 | 10 | |
| α-helix | 616-629 | 14 | |
| α-helix | 646-665 | 20 | |
| α-helix | 669-677 | 9 | |
| α-helix | 681-683 | 3 | |
| α-helix | 684-688 | 5 | |
| α-helix | 690-700 | 11 | |
| α-helix | 705-718 | 14 | |
| α-helix | 723-743 | 21 | |
| α-helix | 748-763 | 16 | |
| α-helix | 765-768 | 4 | |
| α-helix | 772-784 | 13 | |
| α-helix | 794-809 | 16 | |
| α-helix | 810-815 | 6 | |
| α-helix | 817-829 | 13 | |
| α-helix | 831-833 | 3 | |
| α-helix | 837-851 | 15 | |
| α-helix | 857-860 | 4 | |
| α-helix | 864-874 | 11 | |
| α-helix | 878-891 | 14 | |
| β-strand | 894 | 1 | 14 |
| α-helix | 896-902 | 7 | |
| α-helix | 934-938 | 5 | |
| α-helix | 943-960 | 18 | |
| α-helix | 964-982 | 19 | |
| α-helix | 983-989 | 7 | |
| α-helix | 990-1003 | 14 | |
| α-helix | 1006-1022 | 17 | |
| α-helix | 1024-1026 | 3 | |
| α-helix | 1031-1040 | 10 | |
| α-helix | 1046-1062 | 17 | |
| α-helix | 1066-1073 | 8 | |
| α-helix | 1075-1084 | 10 | |
| α-helix | 1088-1090 | 3 | |
| α-helix | 1091-1100 | 10 | |
| α-helix | 1104-1109 | 6 | |
| α-helix | 1111-1123 | 13 | |
| α-helix | 1129-1142 | 14 | |
| α-helix | 1152-1165 | 14 | |
| α-helix | 1167-1169 | 3 | |
| α-helix | 1170-1184 | 15 | |
| α-helix | 1185-1191 | 7 | |
| α-helix | 1192-1201 | 10 | |
| α-helix | 1207-1218 | 12 | |
| α-helix | 1263-1268 | 6 | |
| α-helix | 1269-1272 | 4 | |
| α-helix | 1277-1293 | 17 | |
| α-helix | 1298-1302 | 5 | |
| α-helix | 1306-1308 | 3 | |
| α-helix | 1312-1315 | 4 | |
| α-helix | 1318-1328 | 11 | |
| α-helix | 1331-1347 | 17 | |
| α-helix | 1351-1366 | 16 | |
| α-helix | 1376-1379 | 4 | |
| α-helix | 1380-1389 | 10 | |
| α-helix | 1393-1406 | 14 | |
| α-helix | 1410-1422 | 13 | |
| α-helix | 1426-1439 | 14 | |
| α-helix | 1514-1520 | 7 | |
| α-helix | 1529-1534 | 6 | |
| α-helix | 1541-1545 | 5 | |
| α-helix | 1557-1578 | 22 | |
| α-helix | 1586-1607 | 22 | |
| α-helix | 1612-1625 | 14 | |
| β-strand | 1626 | 1 | 14 |
| α-helix | 1630-1641 | 12 | |
| α-helix | 1650-1657 | 8 | |
| α-helix | 1666-1677 | 12 | |
| α-helix | 1681-1684 | 4 | |
| α-helix | 1694-1705 | 12 | |
| α-helix | 1710-1728 | 19 | |
| α-helix | 1737-1757 | 21 | |
| α-helix | 1758-1762 | 5 | |
| α-helix | 1769-1782 | 14 | |
| α-helix | 1788-1812 | 25 | |
| α-helix | 1868-1876 | 9 | |
| α-helix | 1878-1893 | 16 | |
| α-helix | 1900-1912 | 13 | |
| α-helix | 1917-1929 | 13 | |
| α-helix | 1932-1935 | 4 | |
| α-helix | 1936-1938 | 3 | |
| α-helix | 1941-1944 | 4 | |
| α-helix | 1951-1967 | 17 | |
| α-helix | 1970-1980 | 11 | |
| α-helix | 1985-2002 | 18 | |
| α-helix | 2005-2018 | 14 | |
| α-helix | 2023-2028 | 6 | |
| α-helix | 2031-2041 | 11 | |
| α-helix | 2044-2059 | 16 | |
| α-helix | 2065-2070 | 6 | |
| α-helix | 2071-2075 | 5 | |
| α-helix | 2076-2091 | 16 | |
| α-helix | 2094-2112 | 19 | |
| β-strand | 2121-2122 | 2 | 15 |
| α-helix | 2123-2125 | 3 | |
| α-helix | 2128-2131 | 4 | |
| α-helix | 2138 | 1 | |
| β-strand | 2139 | 1 | 16 |
| α-helix | 2140 | 1 | |
| α-helix | 2149-2151 | 3 | |
| β-strand | 2152 | 1 | 16 |
| β-strand | 2153-2156 | 4 | 17 |
| β-strand | 2159-2160 | 2 | 15 |
| β-strand | 2161-2162 | 2 | 17 |
| β-strand | 2170-2176 | 7 | 17 |
| β-strand | 2181-2188 | 8 | 17 |
| α-helix | 2193-2211 | 19 | |
| α-helix | 2213-2217 | 5 | |
| β-strand | 2227-2229 | 3 | 17 |
| β-strand | 2234-2238 | 5 | 17 |
| β-strand | 2244-2245 | 2 | 18 |
| α-helix | 2246-2256 | 11 | |
| α-helix | 2263-2271 | 9 | |
| α-helix | 2275-2277 | 3 | |
| α-helix | 2280-2292 | 13 | |
| α-helix | 2298-2305 | 8 | |
| α-helix | 2310-2334 | 25 | |
| α-helix | 2341-2343 | 3 | |
| β-strand | 2344-2346 | 3 | 18 |
| β-strand | 2353-2355 | 3 | 18 |
| α-helix | 2363-2367 | 5 | |
| α-helix | 2381-2386 | 6 | |
| α-helix | 2395-2409 | 15 | |
| α-helix | 2411-2422 | 12 | |
| α-helix | 2429-2432 | 4 | |
| α-helix | 2493-2507 | 15 | |
| α-helix | 2521-2533 | 13 | |
| α-helix | 2535-2539 | 5 | |
| α-helix | 2541-2542 | 2 | |
Chain D: 1 helix, 29 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 14-18 | 5 | 4 |
| β-strand | 23-28 | 6 | 4 |
| β-strand | 34-39 | 6 | 4 |
| β-strand | 47-50 | 4 | 5 |
| β-strand | 57-61 | 5 | 5 |
| β-strand | 64-68 | 5 | 5 |
| β-strand | 77 | 1 | 5 |
| β-strand | 93 | 1 | 6 |
| β-strand | 100-102 | 3 | 6 |
| β-strand | 104 | 1 | 7 |
| β-strand | 108-112 | 5 | 6 |
| β-strand | 123-126 | 4 | 6 |
| β-strand | 131-136 | 6 | 7 |
| β-strand | 143-147 | 5 | 7 |
| β-strand | 152-155 | 4 | 7 |
| β-strand | 162-165 | 4 | 7 |
| β-strand | 173-177 | 5 | 8 |
| β-strand | 185-189 | 5 | 8 |
| β-strand | 194-198 | 5 | 8 |
| β-strand | 211-216 | 6 | 8 |
| β-strand | 223-228 | 6 | 9 |
| β-strand | 234-239 | 6 | 9 |
| β-strand | 244-248 | 5 | 9 |
| β-strand | 253-258 | 6 | 9 |
| α-helix | 265-267 | 3 | |
| β-strand | 276-278 | 3 | 10 |
| β-strand | 284-289 | 6 | 10 |
| β-strand | 293-298 | 6 | 10 |
| β-strand | 304-308 | 5 | 10 |
| β-strand | 319-320 | 2 | 4 |
Chain E: 2 helices, 28 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 14-19 | 6 | 19 |
| β-strand | 23-28 | 6 | 19 |
| β-strand | 34-39 | 6 | 19 |
| β-strand | 45-50 | 6 | 20 |
| β-strand | 56-61 | 6 | 20 |
| β-strand | 64-69 | 6 | 20 |
| α-helix | 75-76 | 2 | |
| β-strand | 77-79 | 3 | 20 |
| β-strand | 100-102 | 3 | 21 |
| β-strand | 104 | 1 | 22 |
| β-strand | 108-112 | 5 | 21 |
| β-strand | 123-126 | 4 | 21 |
| β-strand | 131-136 | 6 | 22 |
| β-strand | 142-147 | 6 | 22 |
| β-strand | 152-156 | 5 | 22 |
| β-strand | 162-165 | 4 | 22 |
| β-strand | 173-178 | 6 | 23 |
| β-strand | 184-189 | 6 | 23 |
| β-strand | 194-199 | 6 | 23 |
| β-strand | 210-216 | 7 | 23 |
| β-strand | 223-227 | 5 | 24 |
| β-strand | 234-239 | 6 | 24 |
| β-strand | 243-248 | 6 | 24 |
| β-strand | 253-259 | 7 | 24 |
| α-helix | 265-267 | 3 | |
| β-strand | 276-279 | 4 | 25 |
| β-strand | 284-288 | 5 | 25 |
| β-strand | 293-298 | 6 | 25 |
| β-strand | 304-309 | 6 | 25 |
| β-strand | 315-320 | 6 | 19 |
Chain W: 25 helices, 10 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 59-64 | 6 | 11 |
| α-helix | 70-72 | 3 | |
| α-helix | 79-81 | 3 | |
| β-strand | 85 | 1 | 12 |
| β-strand | 88 | 1 | 12 |
| α-helix | 90-92 | 3 | |
| α-helix | 95-98 | 4 | |
| α-helix | 100-111 | 12 | |
| β-strand | 118-123 | 6 | 11 |
| α-helix | 128-140 | 13 | |
| β-strand | 146-150 | 5 | 11 |
| β-strand | 164 | 1 | 13 |
| β-strand | 175 | 1 | 13 |
| α-helix | 179-185 | 7 | |
| β-strand | 190-194 | 5 | 11 |
| α-helix | 199-218 | 20 | |
| β-strand | 240-244 | 5 | 11 |
| α-helix | 251-253 | 3 | |
| α-helix | 262-266 | 5 | |
| α-helix | 270-281 | 12 | |
| α-helix | 292-295 | 4 | |
| α-helix | 308-327 | 20 | |
| α-helix | 330-336 | 7 | |
| α-helix | 341-357 | 17 | |
| β-strand | 365-366 | 2 | 11 |
| α-helix | 373-375 | 3 | |
| α-helix | 379-397 | 19 | |
| α-helix | 401-406 | 6 | |
| α-helix | 408-422 | 15 | |
| α-helix | 429-430 | 2 | |
| α-helix | 433-439 | 7 | |
| α-helix | 443-456 | 14 | |
| α-helix | 461-470 | 10 | |
| α-helix | 472-479 | 8 | |
| α-helix | 488-498 | 11 | |
Chain Y: 46 helices, 38 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 19-22 | 4 | |
| α-helix | 33-36 | 4 | |
| β-strand | 57-64 | 8 | 26 |
| β-strand | 85 | 1 | 27 |
| β-strand | 88 | 1 | 27 |
| α-helix | 95-113 | 19 | |
| β-strand | 118-123 | 6 | 26 |
| α-helix | 128-140 | 13 | |
| β-strand | 145-150 | 6 | 26 |
| α-helix | 156-158 | 3 | |
| β-strand | 164-167 | 4 | 28 |
| β-strand | 174-177 | 4 | 28 |
| α-helix | 179-185 | 7 | |
| β-strand | 190-194 | 5 | 26 |
| α-helix | 199-218 | 20 | |
| β-strand | 240-244 | 5 | 26 |
| α-helix | 262-268 | 7 | |
| α-helix | 270-281 | 12 | |
| α-helix | 292-295 | 4 | |
| α-helix | 308-327 | 20 | |
| α-helix | 330-337 | 8 | |
| α-helix | 341-358 | 18 | |
| β-strand | 365-366 | 2 | 26 |
| α-helix | 369-372 | 4 | |
| α-helix | 378-392 | 15 | |
| α-helix | 401-406 | 6 | |
| α-helix | 408-420 | 13 | |
| α-helix | 428-430 | 3 | |
| α-helix | 433-439 | 7 | |
| α-helix | 446-456 | 11 | |
| α-helix | 461-470 | 10 | |
| α-helix | 473-480 | 8 | |
| α-helix | 485-487 | 3 | |
| α-helix | 488-501 | 14 | |
| α-helix | 508-511 | 4 | |
| α-helix | 515-523 | 9 | |
| α-helix | 529-545 | 17 | |
| α-helix | 547-555 | 9 | |
| α-helix | 558-565 | 8 | |
| α-helix | 571-585 | 15 | |
| α-helix | 589-597 | 9 | |
| α-helix | 600-606 | 7 | |
| α-helix | 607-609 | 3 | |
| α-helix | 613-628 | 16 | |
| α-helix | 637-649 | 13 | |
| α-helix | 650-653 | 4 | |
| α-helix | 657-685 | 29 | |
| α-helix | 807-820 | 14 | |
| α-helix | 824-839 | 16 | |
| α-helix | 959-968 | 10 | |
| α-helix | 970 | 1 | |
| α-helix | 973-975 | 3 | |
| α-helix | 976-978 | 3 | |
| α-helix | 983-1007 | 25 | |
| β-strand | 1015-1021 | 7 | 29 |
| β-strand | 1028-1030 | 3 | 30 |
| β-strand | 1038-1041 | 4 | 30 |
| β-strand | 1045-1049 | 5 | 30 |
| β-strand | 1056-1061 | 6 | 30 |
| β-strand | 1070-1075 | 6 | 31 |
| α-helix | 1082-1083 | 2 | |
| β-strand | 1084-1088 | 5 | 31 |
| β-strand | 1092-1096 | 5 | 31 |
| β-strand | 1110-1113 | 4 | 31 |
| β-strand | 1128-1132 | 5 | 32 |
| β-strand | 1137-1141 | 5 | 32 |
| β-strand | 1147-1151 | 5 | 32 |
| β-strand | 1158-1161 | 4 | 32 |
| β-strand | 1173-1175 | 3 | 33 |
| β-strand | 1180-1183 | 4 | 33 |
| β-strand | 1190-1194 | 5 | 33 |
| β-strand | 1205-1207 | 3 | 33 |
| β-strand | 1214-1219 | 6 | 34 |
| α-helix | 1226 | 1 | |
| β-strand | 1227-1231 | 5 | 34 |
| β-strand | 1236-1240 | 5 | 34 |
| β-strand | 1243-1249 | 7 | 34 |
| β-strand | 1260-1262 | 3 | 35 |
| β-strand | 1267-1271 | 5 | 35 |
| β-strand | 1277-1280 | 4 | 35 |
| β-strand | 1286-1290 | 5 | 35 |
| β-strand | 1304-1309 | 6 | 29 |
| β-strand | 1316-1320 | 5 | 29 |
| β-strand | 1324-1329 | 6 | 29 |
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| Serine/threonine-protein kinase mTOR | A, B | protein | 2549 | Homo sapiens | P42345 (AlphaFold model) |
| Target of rapamycin complex subunit LST8 | D, E | protein | 326 | Homo sapiens | Q9BVC4 (AlphaFold model) |
| Regulatory-associated protein of mTOR | W, Y | protein | 1335 | Homo sapiens | Q8N122 (AlphaFold model) |
| Eukaryotic translation initiation factor 4E-binding protein 1 | X, Z | protein | 118 | Homo sapiens | Q13541 (AlphaFold model) |
Sequence of entity 1 (A, B), FASTA
>8RCH_1 Serine/threonine-protein kinase mTOR (chains A, B)
MLGTGPAAATTAATTSSNVSVLQQFASGLKSRNEETRAKAAKELQHYVTMELREMSQEES
TRFYDQLNHHIFELVSSSDANERKGGILAIASLIGVEGGNATRIGRFANYLRNLLPSNDP
VVMEMASKAIGRLAMAGDTFTAEYVEFEVKRALEWLGADRNEGRRHAAVLVLRELAISVP
TFFFQQVQPFFDNIFVAVWDPKQAIREGAVAALRACLILTTQREPKEMQKPQWYRHTFEE
AEKGFDETLAKEKGMNRDDRIHGALLILNELVRISSMEGERLREEMEEITQQQLVHDKYC
KDLMGFGTKPRHITPFTSFQAVQPQQSNALVGLLGYSSHQGLMGFGTSPSPAKSTLVESR
CCRDLMEEKFDQVCQWVLKCRNSKNSLIQMTILNLLPRLAAFRPSAFTDTQYLQDTMNHV
LSCVKKEKERTAAFQALGLLSVAVRSEFKVYLPRVLDIIRAALPPKDFAHKRQKAMQVDA
TVFTCISMLARAMGPGIQQDIKELLEPMLAVGLSPALTAVLYDLSRQIPQLKKDIQDGLL
KMLSLVLMHKPLRHPGMPKGLAHQLASPGLTTLPEASDVGSITLALRTLGSFEFEGHSLT
QFVRHCADHFLNSEHKEIRMEAARTCSRLLTPSIHLISGHAHVVSQTAVQVVADVLSKLL
VVGITDPDPDIRYCVLASLDERFDAHLAQAENLQALFVALNDQVFEIRELAICTVGRLSS
MNPAFVMPFLRKMLIQILTELEHSGIGRIKEQSARMLGHLVSNAPRLIRPYMEPILKALI
LKLKDPDPDPNPGVINNVLATIGELAQVSGLEMRKWVDELFIIIMDMLQDSSLLAKRQVA
LWTLGQLVASTGYVVEPYRKYPTLLEVLLNFLKTEQNQGTRREAIRVLGLLGALDPYKHK
VNIGMIDQSRDASAVSLSESKSSQDSSDYSTSEMLVNMGNLPLDEFYPAVSMVALMRIFR
DQSLSHHHTMVVQAITFIFKSLGLKCVQFLPQVMPTFLNVIRVCDGAIREFLFQQLGMLV
SFVKSHIRPYMDEIVTLMREFWVMNTSIQSTIILLIEQIVVALGGEFKLYLPQLIPHMLR
VFMHDNSPGRIVSIKLLAAIQLFGANLDDYLHLLLPPIVKLFDAPEAPLPSRKAALETVD
RLTESLDFTDYASRIIHPIVRTLDQSPELRSTAMDTLSSLVFQLGKKYQIFIPMVNKVLV
RHRINHQRYDVLICRIVKGYTLADEEEDPLIYQHRMLRSGQGDALASGPVETGPMKKLHV
STINLQKAWGAARRVSKDDWLEWLRRLSLELLKDSSSPSLRSCWALAQAYNPMARDLFNA
AFVSCWSELNEDQQDELIRSIELALTSQDIAEVTQTLLNLAEFMEHSDKGPLPLRDDNGI
VLLGERAAKCRAYAKALHYKELEFQKGPTPAILESLISINNKLQQPEAAAGVLEYAMKHF
GELEIQATWYEKLHEWEDALVAYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCCEK
WTLVNDETQAKMARMAAAAAWGLGQWDSMEEYTCMIPRDTHDGAFYRAVLALHQDLFSLA
QQCIDKARDLLDAELTAMAGESYSRAYGAMVSCHMLSELEEVIQYKLVPERREIIRQIWW
ERLQGCQRIVEDWQKILMVRSLVVSPHEDMRTWLKYASLCGKSGRLALAHKTLVLLLGVD
PSRQLDHPLPTVHPQVTYAYMKNMWKSARKIDAFQHMQHFVQTMQQQAQHAIATEDQQHK
QELHKLMARCFLKLGEWQLNLQGINESTIPKVLQYYSAATEHDRSWYKAWHAWAVMNFEA
VLHYKHQNQARDEKKKLRHASGANITNATTAATTAATATTTASTEGSNSESEAESTENSP
TPSPLQKKVTEDLSKTLLMYTVPAVQGFFRSISLSRGNNLQDTLRVLTLWFDYGHWPDVN
EALVEGVKAIQIDTWLQVIPQLIARIDTPRPLVGRLIHQLLTDIGRYHPQALIYPLTVAS
KSTTTARHNAANKILKNMCEHSNTLVQQAMMVSEELIRVAILWHEMWHEGLEEASRLYFG
ERNVKGMFEVLEPLHAMMERGPQTLKETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQA
WDLYYHVFRRISKQLPQLTSLELQYVSPKLLMCRDLELAVPGTYDPNQPIIRIQSIAPSL
QVITSKQRPRKLTLMGSNGHEFVFLLKGHEDLRQDERVMQLFGLVNTLLANDPTSLRKNL
SIQRYAVIPLSTNSGLIGWVPHCDTLHALIRDYREKKKILLNIEHRIMLRMAPDYDHLTL
MQKVEVFEHAVNNTAGDDLAKLLWLKSPSSEVWFDRRTNYTRSLAVMSMVGYILGLGDRH
PSNLMLDRLSGKILHIDFGDCFEVAMTREKFPEKIPFRLTRMLTNAMEVTGLDGNYRITC
HTVMEVLREHKDSVMAVLEAFVYDPLLNWRLMDTNTKGNKRSRTRTDSYSAGQSVEILDG
VELGEPAHKKTGTTVPESIHSFIGDGLVKPEALNKKAIQIINRVRDKLTGRDFSHDDTLD
VPTQVELLIKQATSHENLCQCYIGWCPFW
Sequence of entity 2 (D, E), FASTA
>8RCH_2 Target of rapamycin complex subunit LST8 (chains D, E)
MNTSPGTVGSDPVILATAGYDHTVRFWQAHSGICTRTVQHQDSQVNALEVTPDRSMIAAA
GYQHIRMYDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGGEDCTARIWDLRSRNLQ
CQRIFQVNAPINCVCLHPNQAELIVGDQSGAIHIWDLKTDHNEQLIPEPEVSITSAHIDP
DASYMAAVNSTGNCYVWNLTGGIGDEVTQLIPKTKIPAHTRYALQCRFSPDSTLLATCSA
DQTCKIWRTSNFSLMTELSIKSGNPGESSRGWMWGCAFSGDSQYIVTASSDNLARLWCVE
TGEIKREYGGHQKAVVCLAFNDSVLG
Sequence of entity 3 (W, Y), FASTA
>8RCH_3 Regulatory-associated protein of mTOR (chains W, Y)
MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSV
ALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYK
QSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIY
DLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC
IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPG
RLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSY
NCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWL
TMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL
QSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILA
VIVNSYHTGQEACLQGNLIAICLEQLNDPHPLLRQWVAICLGRIWQNFDSARWCGVRDSA
HEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLVSDGSPMVR
KELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV
SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILS
FETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYK
ATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRD
LPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC
DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLN
RNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQD
CSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMS
SGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS
ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALD
IHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGS
NDYYISVYSVEKRVR
Sequence of entity 4 (X, Z), FASTA
>8RCH_4 Eukaryotic translation initiation factor 4E-binding protein 1 (chains X, Z)
MSGGSSCSQTPSRAIPATRRVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTRIIYDRKFLM
ECRNSPVTKTPPRDLPTIPGVTSPSSDEPPMEASQSHLRNSPEDKRAGGEESQFEMDI
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| MG | Magnesium ion | Mg | 4 |
| ANP | Phosphoaminophosphonic acid-adenylate ester | C10 H17 N6 O12 P3 | 2 |
Primary citation
cryoEM structure of mTORC1 with the cancer-associated 1455-EWED-1458 duplication variant, overall refinement. Anandapadamanaban, M., Hay, I., Perisic, O. et al. To be published.
Other PDB entries of the same protein (UniProt P42345 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 4DRI 1.45 Å, Co-crystal structure of the PPIase domain of FKBP51, Rapamycin and the FRB fragment of…
- 9DBO 1.55 Å, Crystal structure of a synthetic Fab (R3E9) in complex with the FRB domain of mTOR
- 5GPG 1.67 Å, Co-crystal structure of the FK506 binding domain of human FKBP25, Rapamycin and the FRB…
- 5WBH 1.75 Å, Structure of the FRB domain of mTOR bound to a substrate recruitment peptide of S6K1
- 4DRJ 1.8 Å, o-crystal structure of the PPIase domain of FKBP52, Rapamycin and the FRB fragment of mTOR
- 3FAP 1.85 Å, Atomic structures of the rapamycin analogs in complex with both human FKBP12 and frb…
- 8PPZ 1.85 Å, Co-crystal structure of FKBP12, compound 7 and the FRB fragment of mTOR
- 8XI9 1.85 Å, Crystal structure of FRB-FKBP fusion protein in complex with rapamycin
- 9PIW 1.9 Å, Crystal structure of a synthetic Fab (1A) in complex with the FRB domain of mTOR
- 9DL0 2.0 Å, Crystal structure of a synthetic Fab (R3H8) in complex with the FRB domain of mTOR
- 9PJ1 2.05 Å, Crystal structure of a synthetic Fab (4R) in complex with the ternary assembly of…
- 9PIU 2.18 Å, Crystal structure of a synthetic Fab (2C) in complex with the FRB domain of mTOR
Browse structure collections
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