Actin cytoskeleton-regulatory complex protein SLA1 (SLA1) is a 1244-residue protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c). This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P32790.
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The mean pLDDT of this model is 56.2 (low overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 18% |
| 70 to 90 | Confident: backbone generally right | 19% |
| 50 to 70 | Low: treat with caution | 4% |
| Below 50 | Very low: often disordered regions | 60% |
What pLDDT means and how to read it
Component of the PAN1 actin cytoskeleton-regulatory complex required for the internalization of endosomes during actin-coupled endocytosis. The complex links the site of endocytosis to the cell membrane-associated actin cytoskeleton. Mediates uptake of external molecules and vacuolar degradation of plasma membrane proteins. Plays a role in the proper organization of the cell membrane-associated actin cytoskeleton and promotes its destabilization
Component of the PAN1 actin cytoskeleton-regulatory complex. Interacts with ABP1, KRE6, LAS17, LSB5, RSP5, RVS167, VPS1 and YSC84
Nucleus, Cell membrane, Endosome membrane, Cytoplasm, cytoskeleton, actin patch
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 2V1Q | X-ray | 1.2 Å | A/B=356-413 |
| 1SSH | X-ray | 1.4 Å | B=191-202 |
| 9HDB | X-ray | 1.49 Å | A/B=355-414 |
| 3IDW | X-ray | 1.85 Å | A=653-724 |
| 1Z9Z | X-ray | 1.95 Å | A/B=357-413 |
| 2HBP | NMR | A=495-560 | |
| 2JT4 | NMR | A=350-420 |
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