MvcA insertion domain-containing protein (lpg2147) is a 482-residue protein from Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513). This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: Q5ZTL4.
Explore in 3D Color by confidence AlphaFold DB UniProt
The mean pLDDT of this model is 88.6 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 76% |
| 70 to 90 | Confident: backbone generally right | 13% |
| 50 to 70 | Low: treat with caution | 3% |
| Below 50 | Very low: often disordered regions | 9% |
What pLDDT means and how to read it
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 6P5H | X-ray | 1.53 Å | A/B=126-225 |
| 6K3B | X-ray | 1.97 Å | A=7-384 |
| 6ULH | X-ray | 1.97 Å | A=1-384 |
| 5TSC | X-ray | 2.01 Å | A/B=1-462 |
| 6P5B | X-ray | 2.1 Å | A=1-384 |
| 6UMS | X-ray | 2.34 Å | A=1-384 |
| 6KG6 | X-ray | 2.39 Å | B=7-384 |
| 7BXH | X-ray | 2.7 Å | B=1-385 |
| 7BXG | X-ray | 2.71 Å | A=1-385 |
| 6UMP | X-ray | 2.8 Å | A=1-384 |
| 6KL4 | X-ray | 2.85 Å | A=7-384 |
| 6KFP | X-ray | 2.92 Å | A=7-384 |
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