TccC3 (TccC3) is a 960-residue protein from Photorhabdus luminescens. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: Q8GF97.
Explore in 3D Color by confidence AlphaFold DB UniProt
The mean pLDDT of this model is 86.8 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 70% |
| 70 to 90 | Confident: backbone generally right | 15% |
| 50 to 70 | Low: treat with caution | 3% |
| Below 50 | Very low: often disordered regions | 11% |
What pLDDT means and how to read it
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 6SUP | X-ray | 2.0 Å | A=35-678 |
| 4O9X | X-ray | 2.17 Å | A=1-678 |
| 6H6G | X-ray | 3.0 Å | A=1-678 |
| 6SUE | EM | 3.4 Å | F=1-960 |
| 6SUF | EM | 3.4 Å | F=1-960 |
| 6SUQ | X-ray | 3.7 Å | A=1-680 |
| 6H6F | EM | 3.72 Å | F=1-960 |
| 7Z7H | EM | 3.8 Å | F=779-960 |
| 6H6E | EM | 3.95 Å | F=1-960 |
| 7ZBQ | NMR | A=776-960 |
MolViewer loads the AlphaFold model straight from AlphaFold DB into your browser. Show it as a cartoon, color by pLDDT, measure distances and angles, and load a PDB structure next to it to compare.