Actin-binding protein fragmin P is a 371-residue protein from Physarum polycephalum. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: Q94707.
Explore in 3D Color by confidence AlphaFold DB UniProt
The mean pLDDT of this model is 78.8 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 31% |
| 70 to 90 | Confident: backbone generally right | 44% |
| 50 to 70 | Low: treat with caution | 17% |
| Below 50 | Very low: often disordered regions | 8% |
What pLDDT means and how to read it
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 7W4Z | X-ray | 1.15 Å | B=1-160 |
| 7W50 | X-ray | 1.15 Å | B=1-160 |
| 7W51 | X-ray | 1.2 Å | B=1-160 |
| 8GT1 | X-ray | 1.35 Å | B=1-160 |
| 8GSW | X-ray | 1.4 Å | B=1-160 |
| 8GT5 | X-ray | 1.4 Å | B=1-160 |
| 8GSU | X-ray | 1.5 Å | B=1-160 |
| 8GT2 | X-ray | 1.5 Å | B=1-160 |
| 8GT3 | X-ray | 1.5 Å | B=1-160 |
| 6KWZ | X-ray | 1.55 Å | A/B=276-371 |
| 8GT4 | X-ray | 1.55 Å | B=1-160 |
| 9L2N | X-ray | 1.7 Å | B=1-160 |
| 6LJC | X-ray | 1.85 Å | C=162-371 |
| 7W52 | X-ray | 2.0 Å | B/D/F/H=15-160 |
| 6LJD | X-ray | 2.15 Å | C=162-371 |
| 7YNE | X-ray | 2.7 Å | B/D/F/H=1-160 |
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