2DO4: PDB entry 2DO4

Solution structure of the RNA binding domain of squamous cell carcinoma antigen recognized by T cells 3. Determined by solution NMR. Released 17 Apr 2007.

Method
Solution NMR
Organism
Homo sapiens
Chains
1
Atoms
751
Mol. weight
10.77 kDa
Released
17 Apr 2007

Explore 2DO4 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

2DO4 contains 3 α-helices and 6 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 3 helices, 6 β-strands

ElementResiduesLengthSheet
α-helix797-7993
β-strand803-80641
α-helix814-8218
β-strand827-83481
β-strand840-84891
α-helix851-86111
β-strand864-86522
β-strand870-87122
β-strand872-87541

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Squamous cell carcinoma antigen recognized by T-cells 3Aprotein100Homo sapiensQ15020 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>2DO4_1 Squamous cell carcinoma antigen recognized by T-cells 3 (chains A)
GSSGSSGVFRYSTSLEKHKLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGL
AYVEYENESQASQAVMKMDGMTIKENIIKVAISNSGPSSG

Primary citation

Solution structure of the RNA binding domain of squamous cell carcinoma antigen recognized by T cells 3. Suzuki, S., Muto, Y., Inoue, M. et al. To be published.

Other PDB entries of the same protein (UniProt Q15020 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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