Magi-1 PDZ1. Determined by solution NMR. Released 27 Oct 2010.
Explore 2KPK in 3D Show helices and sheets RCSB PDB PDBe
2KPK contains 4 α-helices and 6 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
| Element | Residues | Length | Sheet |
|---|---|---|---|
| β-strand | 14-22 | 9 | 1 |
| β-strand | 29-36 | 8 | 1 |
| β-strand | 39-46 | 8 | 1 |
| α-helix | 51-55 | 5 | |
| β-strand | 63-67 | 5 | 1 |
| β-strand | 70-71 | 2 | 1 |
| α-helix | 77-86 | 10 | |
| α-helix | 88 | 1 | |
| β-strand | 91-99 | 9 | 1 |
| α-helix | 102-103 | 2 |
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|---|---|---|---|---|
| Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 | A | protein | 129 | Homo sapiens | Q96QZ7 (AlphaFold model) |
>2KPK_1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 (chains A) GAMGKPFFTRNPSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDG KMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPFDPDDPNTSLVT SVAILDKEP
The structural and dynamic response of MAGI-1 PDZ1 with non-canonical domain boundaries to binding of human papillomavirus (HPV) E6. Charbonnier, S., Nomine, Y., Ramirez, J. et al. J Mol Biol (2011). DOI 10.1016/j.jmb.2011.01.015 · PubMed
Other PDB entries of the same protein (UniProt Q96QZ7 (AlphaFold model), which also has an AlphaFold model), best resolution first:
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