2X56: Yersinia Pestis Plasminogen Activator Pla

Yersinia Pestis Plasminogen Activator Pla (Native). Determined by X-ray diffraction at 2.3 Å resolution. Released 28 Jul 2010.

Method
X-ray diffraction
Resolution
2.3 Å
Organism
YERSINIA PESTIS
Chains
1
Atoms
2,502
Mol. weight
38.17 kDa
Ligands
C8E
Released
28 Jul 2010

Explore 2X56 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

2X56 contains 3 α-helices and 14 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 3 helices, 14 β-strands

ElementResiduesLengthSheet
β-strand14-32191
β-strand39-62241
β-strand65-74101
β-strand78-8691
β-strand97-122261
β-strand126-144191
β-strand147-15041
α-helix151-1533
β-strand155-15841
α-helix159-1602
β-strand164-185221
β-strand188-208211
β-strand213-236241
β-strand239-250121
β-strand27011
α-helix272-2743
β-strand275-291171

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Coagulase/fibrinolysinAprotein292YERSINIA PESTISP17811 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>2X56_1 COAGULASE/FIBRINOLYSIN (chains A)
ASSQLIPNISPDSFTVAASTGMLSGKSHEMLYDAETGRKISQLDWKIKNVAILKGDISWD
PYSFLTLNARGWTSLASGSGNMDDYDWMNENQSEWTDHSSHPATNVNHANEYDLNVKGWL
LQDENYKAGITAGYQETRFSWTATGGSYSYNNGAYTGNFPKGVRVIGYNQRFSMPYIGLA
GQYRINDFELNALFKFSDWVRAHDNDEHYMRDLTFREKTSGSRYYGTVINAGYYVTPNAK
VFAEFTYSKYDEGKGGTQTIDKNSGDSVSIGGDAAGISNKNYTVTAGLQYRF

Ligands and cofactors

IDNameFormulaCopies
C8E(hydroxyethyloxy)tri(ethyloxy)octaneC16 H34 O518

Primary citation

An Active Site Water Network in the Plasminogen Activator Pla from Yersinia Pestis. Eren, E., Murphy, M., Goguen, J. et al. Structure (2010) 18:809. DOI 10.1016/J.STR.2010.03.013 · PubMed

Other PDB entries of the same protein (UniProt P17811 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

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