3K71: Integrin alphaX beta2 ectodomain
Structure of integrin alphaX beta2 ectodomain. Determined by X-ray diffraction at 3.95 Å resolution. Released 12 Jan 2010.
- Method
- X-ray diffraction
- Resolution
- 3.95 Å
- Organism
- Homo sapiens
- Chains
- 8
- Atoms
- 50,191
- Mol. weight
- 797.56 kDa
- Ligands
- MG, CA, NAG
- Released
- 12 Jan 2010
Explore 3K71 in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
3K71 contains 144 α-helices and 515 β-strands across 8 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain A: 6 helices, 79 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 3 | 1 | 1 |
| β-strand | 9-11 | 3 | 2 |
| β-strand | 21-24 | 4 | 3 |
| β-strand | 29-33 | 5 | 3 |
| β-strand | 47-51 | 5 | 3 |
| β-strand | 56-59 | 4 | 3 |
| β-strand | 76-80 | 5 | 4 |
| β-strand | 85-90 | 6 | 4 |
| β-strand | 94-95 | 2 | 5 |
| β-strand | 102-103 | 2 | 5 |
| β-strand | 106-110 | 5 | 4 |
| β-strand | 116 | 1 | 4 |
| β-strand | 332 | 1 | 5 |
| β-strand | 339 | 1 | 6 |
| β-strand | 347-350 | 4 | 6 |
| β-strand | 358 | 1 | 7 |
| β-strand | 359-362 | 4 | 6 |
| α-helix | 368-369 | 2 | |
| β-strand | 372 | 1 | 6 |
| β-strand | 386 | 1 | 7 |
| β-strand | 390-391 | 2 | 8 |
| β-strand | 400-405 | 6 | 8 |
| α-helix | 408-410 | 3 | |
| β-strand | 413-418 | 6 | 8 |
| β-strand | 426-430 | 5 | 8 |
| β-strand | 443-446 | 4 | 9 |
| β-strand | 456-460 | 5 | 9 |
| β-strand | 471 | 1 | 10 |
| β-strand | 473-477 | 5 | 9 |
| β-strand | 502 | 1 | 10 |
| β-strand | 505-510 | 6 | 11 |
| β-strand | 519-523 | 5 | 11 |
| β-strand | 533 | 1 | 12 |
| β-strand | 534-538 | 5 | 11 |
| β-strand | 539 | 1 | 13 |
| β-strand | 545 | 1 | 13 |
| β-strand | 551 | 1 | 11 |
| β-strand | 554 | 1 | 12 |
| β-strand | 565-573 | 9 | 2 |
| β-strand | 582-587 | 6 | 2 |
| β-strand | 591-595 | 5 | 2 |
| β-strand | 596 | 1 | 1 |
| β-strand | 599 | 1 | 14 |
| β-strand | 602-608 | 7 | 15 |
| β-strand | 629-639 | 11 | 15 |
| β-strand | 654-662 | 9 | 16 |
| β-strand | 672-673 | 2 | 15 |
| β-strand | 680-687 | 8 | 16 |
| β-strand | 693-700 | 8 | 15 |
| α-helix | 710 | 1 | |
| β-strand | 711-717 | 7 | 16 |
| β-strand | 733 | 1 | 14 |
| β-strand | 741-746 | 6 | 16 |
| β-strand | 764-767 | 4 | 17 |
| β-strand | 775-776 | 2 | 18 |
| β-strand | 781-788 | 8 | 17 |
| β-strand | 795 | 1 | 19 |
| β-strand | 799-805 | 7 | 20 |
| β-strand | 808-811 | 4 | 17 |
| β-strand | 828-833 | 6 | 20 |
| β-strand | 839-845 | 7 | 20 |
| β-strand | 851 | 1 | 19 |
| β-strand | 857-865 | 9 | 17 |
| β-strand | 874-877 | 4 | 21 |
| β-strand | 878-882 | 5 | 20 |
| β-strand | 883 | 1 | 22 |
| β-strand | 886 | 1 | 22 |
| β-strand | 896-900 | 5 | 21 |
| β-strand | 902-905 | 4 | 18 |
| β-strand | 907-911 | 5 | 23 |
| β-strand | 932-940 | 9 | 23 |
| β-strand | 948-953 | 6 | 24 |
| β-strand | 964 | 1 | 25 |
| β-strand | 968-970 | 3 | 23 |
| β-strand | 979-984 | 6 | 24 |
| α-helix | 991-997 | 7 | |
| β-strand | 1000-1001 | 2 | 24 |
| β-strand | 1008-1015 | 8 | 24 |
| β-strand | 1025-1030 | 6 | 23 |
| β-strand | 1032 | 1 | 25 |
| α-helix | 1035-1037 | 3 | |
| β-strand | 1046-1054 | 9 | 24 |
| β-strand | 1060-1062 | 3 | 18 |
| α-helix | 1068-1070 | 3 | |
| β-strand | 1071-1077 | 7 | 24 |
Chain B: 27 helices, 46 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 12-15 | 4 | |
| β-strand | 22-24 | 3 | 26 |
| α-helix | 36-39 | 4 | |
| β-strand | 40-41 | 2 | 26 |
| α-helix | 43-49 | 7 | |
| β-strand | 56-57 | 2 | 26 |
| β-strand | 62 | 1 | 27 |
| β-strand | 65 | 1 | 28 |
| β-strand | 77 | 1 | 29 |
| β-strand | 81 | 1 | 28 |
| β-strand | 83-85 | 3 | 27 |
| α-helix | 90 | 1 | |
| β-strand | 91-97 | 7 | 29 |
| β-strand | 107-112 | 6 | 30 |
| α-helix | 118-122 | 5 | |
| α-helix | 131-136 | 6 | |
| β-strand | 144-149 | 6 | 30 |
| α-helix | 176-179 | 4 | |
| β-strand | 183-189 | 7 | 30 |
| α-helix | 193-201 | 9 | |
| β-strand | 212 | 1 | 31 |
| α-helix | 214-221 | 8 | |
| α-helix | 225-228 | 4 | |
| β-strand | 236-241 | 6 | 30 |
| β-strand | 245 | 1 | 31 |
| α-helix | 250-254 | 5 | |
| β-strand | 270 | 1 | 30 |
| α-helix | 274-276 | 3 | |
| α-helix | 278-281 | 4 | |
| α-helix | 282-284 | 3 | |
| α-helix | 285-291 | 7 | |
| β-strand | 295 | 1 | 30 |
| β-strand | 298-300 | 3 | 30 |
| α-helix | 302-304 | 3 | |
| α-helix | 309-314 | 6 | |
| β-strand | 320-322 | 3 | 30 |
| α-helix | 332-335 | 4 | |
| α-helix | 337-341 | 5 | |
| β-strand | 356-359 | 4 | 29 |
| β-strand | 362 | 1 | 32 |
| β-strand | 370 | 1 | 32 |
| β-strand | 387-395 | 9 | 29 |
| α-helix | 399-400 | 2 | |
| β-strand | 402-405 | 4 | 27 |
| α-helix | 407-408 | 2 | |
| β-strand | 416-421 | 6 | 27 |
| α-helix | 437-439 | 3 | |
| β-strand | 441-443 | 3 | 33 |
| β-strand | 448-450 | 3 | 33 |
| β-strand | 454-455 | 2 | 34 |
| β-strand | 461-462 | 2 | 34 |
| α-helix | 470-472 | 3 | |
| α-helix | 483-485 | 3 | |
| β-strand | 488-491 | 4 | 35 |
| β-strand | 494-497 | 4 | 35 |
| β-strand | 507-508 | 2 | 36 |
| β-strand | 514-515 | 2 | 36 |
| β-strand | 521-522 | 2 | 37 |
| β-strand | 525-526 | 2 | 37 |
| α-helix | 529-532 | 4 | |
| β-strand | 533-536 | 4 | 38 |
| β-strand | 539-542 | 4 | 38 |
| α-helix | 543 | 1 | |
| β-strand | 561 | 1 | 39 |
| β-strand | 567 | 1 | 39 |
| β-strand | 574 | 1 | 40 |
| β-strand | 579 | 1 | 40 |
| α-helix | 604-607 | 4 | |
| β-strand | 629 | 1 | 41 |
| β-strand | 640-643 | 4 | 42 |
| β-strand | 649-654 | 6 | 42 |
| β-strand | 664 | 1 | 41 |
| β-strand | 665-667 | 3 | 42 |
Chain C: 6 helices, 79 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 3 | 1 | 43 |
| β-strand | 9-11 | 3 | 44 |
| β-strand | 21-24 | 4 | 45 |
| β-strand | 29-33 | 5 | 45 |
| β-strand | 47-51 | 5 | 45 |
| β-strand | 56-59 | 4 | 45 |
| β-strand | 76-80 | 5 | 46 |
| β-strand | 85-90 | 6 | 46 |
| β-strand | 94-95 | 2 | 47 |
| β-strand | 102-103 | 2 | 47 |
| β-strand | 106-110 | 5 | 46 |
| β-strand | 116-117 | 2 | 46 |
| β-strand | 332 | 1 | 47 |
| β-strand | 339 | 1 | 48 |
| β-strand | 347-350 | 4 | 48 |
| β-strand | 358 | 1 | 49 |
| β-strand | 359-362 | 4 | 48 |
| α-helix | 368-369 | 2 | |
| β-strand | 372 | 1 | 48 |
| β-strand | 386 | 1 | 49 |
| β-strand | 390-391 | 2 | 50 |
| β-strand | 400-405 | 6 | 50 |
| α-helix | 408-410 | 3 | |
| β-strand | 413-418 | 6 | 50 |
| β-strand | 426-430 | 5 | 50 |
| β-strand | 443-446 | 4 | 51 |
| β-strand | 456-460 | 5 | 51 |
| β-strand | 471 | 1 | 52 |
| β-strand | 473-477 | 5 | 51 |
| β-strand | 502 | 1 | 52 |
| β-strand | 505-510 | 6 | 53 |
| β-strand | 519-523 | 5 | 53 |
| β-strand | 533 | 1 | 54 |
| β-strand | 534-538 | 5 | 53 |
| β-strand | 539 | 1 | 55 |
| β-strand | 545 | 1 | 55 |
| β-strand | 551 | 1 | 53 |
| β-strand | 554 | 1 | 54 |
| β-strand | 565-573 | 9 | 44 |
| β-strand | 582-587 | 6 | 44 |
| β-strand | 591-595 | 5 | 44 |
| β-strand | 596 | 1 | 43 |
| β-strand | 599 | 1 | 56 |
| β-strand | 602-608 | 7 | 57 |
| β-strand | 629-639 | 11 | 57 |
| β-strand | 654-662 | 9 | 58 |
| β-strand | 672-673 | 2 | 57 |
| β-strand | 680-687 | 8 | 58 |
| β-strand | 693-700 | 8 | 57 |
| α-helix | 710 | 1 | |
| β-strand | 711-717 | 7 | 58 |
| β-strand | 733 | 1 | 56 |
| β-strand | 741-746 | 6 | 58 |
| β-strand | 764-767 | 4 | 59 |
| β-strand | 775-776 | 2 | 60 |
| β-strand | 781-788 | 8 | 59 |
| β-strand | 795 | 1 | 61 |
| β-strand | 799-805 | 7 | 62 |
| β-strand | 808-811 | 4 | 59 |
| β-strand | 828-833 | 6 | 62 |
| β-strand | 839-845 | 7 | 62 |
| β-strand | 851 | 1 | 61 |
| β-strand | 857-865 | 9 | 59 |
| β-strand | 874-877 | 4 | 21 |
| β-strand | 878-882 | 5 | 62 |
| β-strand | 883 | 1 | 63 |
| β-strand | 886 | 1 | 63 |
| β-strand | 896-900 | 5 | 21 |
| β-strand | 902-905 | 4 | 60 |
| β-strand | 907-911 | 5 | 64 |
| β-strand | 932-940 | 9 | 64 |
| β-strand | 948-953 | 6 | 65 |
| β-strand | 964 | 1 | 66 |
| β-strand | 968-970 | 3 | 64 |
| β-strand | 979-984 | 6 | 65 |
| α-helix | 991-997 | 7 | |
| β-strand | 1000-1001 | 2 | 65 |
| β-strand | 1008-1015 | 8 | 65 |
| β-strand | 1025-1030 | 6 | 64 |
| β-strand | 1032 | 1 | 66 |
| α-helix | 1035-1037 | 3 | |
| β-strand | 1046-1054 | 9 | 65 |
| β-strand | 1060-1062 | 3 | 60 |
| α-helix | 1068-1070 | 3 | |
| β-strand | 1071-1077 | 7 | 65 |
Chain D: 27 helices, 48 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 12-15 | 4 | |
| β-strand | 22-24 | 3 | 67 |
| α-helix | 37-39 | 3 | |
| β-strand | 40-41 | 2 | 67 |
| α-helix | 43-49 | 7 | |
| β-strand | 56-57 | 2 | 67 |
| β-strand | 62 | 1 | 68 |
| β-strand | 65 | 1 | 69 |
| β-strand | 77 | 1 | 70 |
| β-strand | 81 | 1 | 69 |
| β-strand | 83-85 | 3 | 68 |
| α-helix | 90 | 1 | |
| β-strand | 91-97 | 7 | 70 |
| β-strand | 107-112 | 6 | 71 |
| α-helix | 118-122 | 5 | |
| α-helix | 131-136 | 6 | |
| β-strand | 144-149 | 6 | 71 |
| α-helix | 176-179 | 4 | |
| β-strand | 183-189 | 7 | 71 |
| α-helix | 193-201 | 9 | |
| β-strand | 212 | 1 | 72 |
| α-helix | 214-221 | 8 | |
| α-helix | 225-228 | 4 | |
| β-strand | 236-241 | 6 | 71 |
| β-strand | 245 | 1 | 72 |
| α-helix | 250-254 | 5 | |
| β-strand | 270 | 1 | 71 |
| α-helix | 274-276 | 3 | |
| α-helix | 278-281 | 4 | |
| α-helix | 282-284 | 3 | |
| α-helix | 285-291 | 7 | |
| β-strand | 295 | 1 | 71 |
| β-strand | 298-300 | 3 | 71 |
| α-helix | 302-304 | 3 | |
| α-helix | 309-314 | 6 | |
| β-strand | 320-322 | 3 | 71 |
| α-helix | 332-335 | 4 | |
| α-helix | 337-341 | 5 | |
| β-strand | 356-359 | 4 | 70 |
| β-strand | 362 | 1 | 73 |
| β-strand | 370 | 1 | 73 |
| β-strand | 387-395 | 9 | 70 |
| α-helix | 399-400 | 2 | |
| β-strand | 402-405 | 4 | 68 |
| α-helix | 407-408 | 2 | |
| β-strand | 416-421 | 6 | 68 |
| α-helix | 437-439 | 3 | |
| β-strand | 441-443 | 3 | 74 |
| β-strand | 448-450 | 3 | 74 |
| β-strand | 454-455 | 2 | 75 |
| β-strand | 461-462 | 2 | 75 |
| α-helix | 470-472 | 3 | |
| α-helix | 483-485 | 3 | |
| β-strand | 488-491 | 4 | 76 |
| β-strand | 494-497 | 4 | 76 |
| β-strand | 507-508 | 2 | 77 |
| β-strand | 514-515 | 2 | 77 |
| β-strand | 521-522 | 2 | 78 |
| β-strand | 525-526 | 2 | 78 |
| α-helix | 529-532 | 4 | |
| β-strand | 533-536 | 4 | 79 |
| β-strand | 539-542 | 4 | 79 |
| α-helix | 543 | 1 | |
| β-strand | 547 | 1 | 80 |
| β-strand | 553 | 1 | 80 |
| β-strand | 561 | 1 | 81 |
| β-strand | 567 | 1 | 81 |
| β-strand | 574 | 1 | 82 |
| β-strand | 579 | 1 | 82 |
| α-helix | 604-607 | 4 | |
| β-strand | 629 | 1 | 83 |
| β-strand | 640-643 | 4 | 84 |
| β-strand | 649-654 | 6 | 84 |
| β-strand | 664 | 1 | 83 |
| β-strand | 665-667 | 3 | 84 |
Chain E: 6 helices, 79 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 3 | 1 | 85 |
| β-strand | 9-11 | 3 | 86 |
| β-strand | 21-24 | 4 | 87 |
| β-strand | 29-33 | 5 | 87 |
| β-strand | 47-51 | 5 | 87 |
| β-strand | 56-59 | 4 | 87 |
| β-strand | 76-80 | 5 | 88 |
| β-strand | 85-90 | 6 | 88 |
| β-strand | 94-95 | 2 | 89 |
| β-strand | 102-103 | 2 | 89 |
| β-strand | 106-110 | 5 | 88 |
| β-strand | 116 | 1 | 88 |
| β-strand | 332 | 1 | 89 |
| β-strand | 339 | 1 | 90 |
| β-strand | 347-350 | 4 | 90 |
| β-strand | 358 | 1 | 91 |
| β-strand | 359-362 | 4 | 90 |
| α-helix | 368-369 | 2 | |
| β-strand | 370-372 | 3 | 90 |
| β-strand | 386 | 1 | 91 |
| β-strand | 390-391 | 2 | 92 |
| β-strand | 400-405 | 6 | 92 |
| α-helix | 408-410 | 3 | |
| β-strand | 413-418 | 6 | 92 |
| β-strand | 426-430 | 5 | 92 |
| β-strand | 443-446 | 4 | 93 |
| β-strand | 456-460 | 5 | 93 |
| β-strand | 471 | 1 | 94 |
| β-strand | 473-477 | 5 | 93 |
| β-strand | 502 | 1 | 94 |
| β-strand | 505-510 | 6 | 95 |
| β-strand | 519-523 | 5 | 95 |
| β-strand | 533 | 1 | 96 |
| β-strand | 534-538 | 5 | 95 |
| β-strand | 539 | 1 | 97 |
| β-strand | 545 | 1 | 97 |
| β-strand | 551 | 1 | 95 |
| β-strand | 554 | 1 | 96 |
| β-strand | 565-573 | 9 | 86 |
| β-strand | 582-587 | 6 | 86 |
| β-strand | 591-595 | 5 | 86 |
| β-strand | 596 | 1 | 85 |
| β-strand | 599 | 1 | 98 |
| β-strand | 602-608 | 7 | 99 |
| β-strand | 629-639 | 11 | 99 |
| β-strand | 654-662 | 9 | 100 |
| β-strand | 672-673 | 2 | 99 |
| β-strand | 680-687 | 8 | 100 |
| β-strand | 693-700 | 8 | 99 |
| α-helix | 710 | 1 | |
| β-strand | 711-717 | 7 | 100 |
| β-strand | 733 | 1 | 98 |
| β-strand | 741-746 | 6 | 100 |
| β-strand | 764-767 | 4 | 101 |
| β-strand | 775-776 | 2 | 102 |
| β-strand | 781-788 | 8 | 101 |
| β-strand | 795 | 1 | 103 |
| β-strand | 799-805 | 7 | 104 |
| β-strand | 808-811 | 4 | 101 |
| β-strand | 828-833 | 6 | 104 |
| β-strand | 839-845 | 7 | 104 |
| β-strand | 851 | 1 | 103 |
| β-strand | 857-865 | 9 | 101 |
| β-strand | 874-877 | 4 | 105 |
| β-strand | 878-882 | 5 | 104 |
| β-strand | 883 | 1 | 106 |
| β-strand | 886 | 1 | 106 |
| β-strand | 896-900 | 5 | 105 |
| β-strand | 902-905 | 4 | 102 |
| β-strand | 907-911 | 5 | 107 |
| β-strand | 932-940 | 9 | 107 |
| β-strand | 948-953 | 6 | 108 |
| β-strand | 964 | 1 | 109 |
| β-strand | 968-970 | 3 | 107 |
| β-strand | 979-984 | 6 | 108 |
| α-helix | 991-997 | 7 | |
| β-strand | 1000-1001 | 2 | 108 |
| β-strand | 1008-1015 | 8 | 108 |
| β-strand | 1025-1030 | 6 | 107 |
| β-strand | 1032 | 1 | 109 |
| α-helix | 1035-1037 | 3 | |
| β-strand | 1046-1054 | 9 | 108 |
| β-strand | 1060-1062 | 3 | 102 |
| α-helix | 1068-1070 | 3 | |
| β-strand | 1071-1077 | 7 | 108 |
Chain F: 27 helices, 48 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 12-15 | 4 | |
| β-strand | 22-24 | 3 | 110 |
| α-helix | 37-39 | 3 | |
| β-strand | 40-41 | 2 | 110 |
| α-helix | 43-49 | 7 | |
| β-strand | 56-57 | 2 | 110 |
| β-strand | 62 | 1 | 111 |
| β-strand | 65 | 1 | 112 |
| β-strand | 77 | 1 | 113 |
| β-strand | 81 | 1 | 112 |
| β-strand | 83-85 | 3 | 111 |
| α-helix | 90 | 1 | |
| β-strand | 91-97 | 7 | 113 |
| β-strand | 107-112 | 6 | 114 |
| α-helix | 118-122 | 5 | |
| α-helix | 131-136 | 6 | |
| β-strand | 144-149 | 6 | 114 |
| α-helix | 176-179 | 4 | |
| β-strand | 183-189 | 7 | 114 |
| α-helix | 193-201 | 9 | |
| β-strand | 212 | 1 | 115 |
| α-helix | 214-221 | 8 | |
| α-helix | 225-228 | 4 | |
| β-strand | 236-241 | 6 | 114 |
| β-strand | 245 | 1 | 115 |
| α-helix | 250-254 | 5 | |
| β-strand | 270 | 1 | 114 |
| α-helix | 274-276 | 3 | |
| α-helix | 278-281 | 4 | |
| α-helix | 282-284 | 3 | |
| α-helix | 285-291 | 7 | |
| β-strand | 295 | 1 | 114 |
| β-strand | 298-300 | 3 | 114 |
| α-helix | 302-304 | 3 | |
| α-helix | 309-314 | 6 | |
| β-strand | 320-322 | 3 | 114 |
| α-helix | 331-333 | 3 | |
| α-helix | 337-341 | 5 | |
| β-strand | 356-359 | 4 | 113 |
| β-strand | 362 | 1 | 116 |
| β-strand | 370 | 1 | 116 |
| β-strand | 387-395 | 9 | 113 |
| α-helix | 399-400 | 2 | |
| β-strand | 402-405 | 4 | 111 |
| α-helix | 407-408 | 2 | |
| β-strand | 416-421 | 6 | 111 |
| α-helix | 437-439 | 3 | |
| β-strand | 441-443 | 3 | 117 |
| β-strand | 448-450 | 3 | 117 |
| β-strand | 455 | 1 | 118 |
| β-strand | 461 | 1 | 118 |
| α-helix | 470-472 | 3 | |
| α-helix | 483-485 | 3 | |
| β-strand | 488-491 | 4 | 119 |
| β-strand | 494-497 | 4 | 119 |
| β-strand | 507-508 | 2 | 120 |
| β-strand | 514-515 | 2 | 120 |
| β-strand | 521-522 | 2 | 121 |
| β-strand | 525-526 | 2 | 121 |
| α-helix | 529-532 | 4 | |
| β-strand | 533-536 | 4 | 122 |
| β-strand | 539-542 | 4 | 122 |
| α-helix | 543 | 1 | |
| β-strand | 547 | 1 | 123 |
| β-strand | 553 | 1 | 123 |
| β-strand | 561 | 1 | 124 |
| β-strand | 567 | 1 | 124 |
| β-strand | 574 | 1 | 125 |
| β-strand | 579 | 1 | 125 |
| α-helix | 604-607 | 4 | |
| β-strand | 629 | 1 | 126 |
| β-strand | 640-643 | 4 | 127 |
| β-strand | 649-654 | 6 | 127 |
| β-strand | 664 | 1 | 126 |
| β-strand | 665-667 | 3 | 127 |
Chain G: 18 helices, 90 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 3 | 1 | 128 |
| β-strand | 9-11 | 3 | 129 |
| β-strand | 21-24 | 4 | 130 |
| β-strand | 29-33 | 5 | 130 |
| β-strand | 47-51 | 5 | 130 |
| β-strand | 56-59 | 4 | 130 |
| β-strand | 76-80 | 5 | 131 |
| β-strand | 85-90 | 6 | 131 |
| β-strand | 94-95 | 2 | 132 |
| β-strand | 102-103 | 2 | 132 |
| β-strand | 106-110 | 5 | 131 |
| β-strand | 116 | 1 | 131 |
| α-helix | 125-126 | 2 | |
| β-strand | 131 | 1 | 133 |
| β-strand | 132-138 | 7 | 134 |
| α-helix | 146-160 | 15 | |
| β-strand | 168-174 | 7 | 134 |
| β-strand | 178-180 | 3 | 134 |
| α-helix | 185-188 | 4 | |
| α-helix | 194-196 | 3 | |
| β-strand | 207 | 1 | 135 |
| α-helix | 209-217 | 9 | |
| β-strand | 232 | 1 | 133 |
| β-strand | 233-239 | 7 | 134 |
| β-strand | 244 | 1 | 135 |
| α-helix | 250-259 | 10 | |
| β-strand | 262-268 | 7 | 134 |
| β-strand | 269 | 1 | 136 |
| α-helix | 272-274 | 3 | |
| α-helix | 280-283 | 4 | |
| α-helix | 287 | 1 | |
| α-helix | 289 | 1 | |
| β-strand | 297 | 1 | 136 |
| α-helix | 301-303 | 3 | |
| α-helix | 307-315 | 9 | |
| β-strand | 332 | 1 | 132 |
| β-strand | 339 | 1 | 137 |
| β-strand | 347-350 | 4 | 137 |
| β-strand | 358 | 1 | 138 |
| β-strand | 359-362 | 4 | 137 |
| α-helix | 368-369 | 2 | |
| β-strand | 370-372 | 3 | 137 |
| β-strand | 386 | 1 | 138 |
| β-strand | 390-391 | 2 | 139 |
| β-strand | 400-405 | 6 | 139 |
| α-helix | 408-410 | 3 | |
| β-strand | 413-418 | 6 | 139 |
| β-strand | 426-430 | 5 | 139 |
| β-strand | 443-446 | 4 | 140 |
| β-strand | 456-460 | 5 | 140 |
| β-strand | 471 | 1 | 141 |
| β-strand | 473-477 | 5 | 140 |
| β-strand | 502 | 1 | 141 |
| β-strand | 505-510 | 6 | 142 |
| β-strand | 519-523 | 5 | 142 |
| β-strand | 533 | 1 | 143 |
| β-strand | 534-538 | 5 | 142 |
| β-strand | 539 | 1 | 144 |
| β-strand | 545 | 1 | 144 |
| β-strand | 551 | 1 | 142 |
| β-strand | 554 | 1 | 143 |
| β-strand | 565-573 | 9 | 129 |
| β-strand | 582-587 | 6 | 129 |
| β-strand | 591-595 | 5 | 129 |
| β-strand | 596 | 1 | 128 |
| β-strand | 599 | 1 | 145 |
| β-strand | 602-608 | 7 | 146 |
| β-strand | 629-639 | 11 | 146 |
| β-strand | 654-662 | 9 | 147 |
| β-strand | 672-673 | 2 | 146 |
| β-strand | 680-687 | 8 | 147 |
| β-strand | 693-700 | 8 | 146 |
| α-helix | 710 | 1 | |
| β-strand | 711-717 | 7 | 147 |
| β-strand | 733 | 1 | 145 |
| β-strand | 741-746 | 6 | 147 |
| β-strand | 764-767 | 4 | 148 |
| β-strand | 775-776 | 2 | 149 |
| β-strand | 781-788 | 8 | 148 |
| β-strand | 795 | 1 | 150 |
| β-strand | 799-805 | 7 | 151 |
| β-strand | 808-811 | 4 | 148 |
| β-strand | 828-833 | 6 | 151 |
| β-strand | 839-845 | 7 | 151 |
| β-strand | 851 | 1 | 150 |
| β-strand | 857-865 | 9 | 148 |
| β-strand | 874-877 | 4 | 105 |
| β-strand | 878-882 | 5 | 151 |
| β-strand | 883 | 1 | 152 |
| β-strand | 886 | 1 | 152 |
| β-strand | 896-900 | 5 | 105 |
| β-strand | 902-905 | 4 | 149 |
| β-strand | 907-911 | 5 | 153 |
| β-strand | 932-940 | 9 | 153 |
| β-strand | 948-953 | 6 | 154 |
| β-strand | 964 | 1 | 155 |
| β-strand | 968-970 | 3 | 153 |
| β-strand | 979-984 | 6 | 154 |
| α-helix | 991-997 | 7 | |
| β-strand | 1000-1001 | 2 | 154 |
| β-strand | 1008-1015 | 8 | 154 |
| β-strand | 1025-1030 | 6 | 153 |
| β-strand | 1032 | 1 | 155 |
| α-helix | 1035-1037 | 3 | |
| β-strand | 1046-1054 | 9 | 154 |
| β-strand | 1060-1062 | 3 | 149 |
| α-helix | 1068-1070 | 3 | |
| β-strand | 1071-1077 | 7 | 154 |
Chain H: 27 helices, 46 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 12-15 | 4 | |
| β-strand | 22-24 | 3 | 156 |
| α-helix | 37-39 | 3 | |
| β-strand | 40-41 | 2 | 156 |
| α-helix | 43-49 | 7 | |
| β-strand | 56-57 | 2 | 156 |
| β-strand | 62 | 1 | 157 |
| β-strand | 65 | 1 | 158 |
| β-strand | 77 | 1 | 159 |
| β-strand | 81 | 1 | 158 |
| β-strand | 83-85 | 3 | 157 |
| α-helix | 90 | 1 | |
| β-strand | 91-97 | 7 | 159 |
| β-strand | 107-112 | 6 | 160 |
| α-helix | 118-122 | 5 | |
| α-helix | 131-136 | 6 | |
| β-strand | 144-149 | 6 | 160 |
| α-helix | 176-179 | 4 | |
| β-strand | 183-189 | 7 | 160 |
| α-helix | 193-201 | 9 | |
| β-strand | 212 | 1 | 161 |
| α-helix | 214-221 | 8 | |
| α-helix | 225-228 | 4 | |
| β-strand | 236-241 | 6 | 160 |
| β-strand | 245 | 1 | 161 |
| α-helix | 250-254 | 5 | |
| β-strand | 270 | 1 | 160 |
| α-helix | 274-276 | 3 | |
| α-helix | 278-281 | 4 | |
| α-helix | 282-284 | 3 | |
| α-helix | 285-291 | 7 | |
| β-strand | 295 | 1 | 160 |
| β-strand | 298-300 | 3 | 160 |
| α-helix | 302-304 | 3 | |
| α-helix | 309-314 | 6 | |
| β-strand | 320-322 | 3 | 160 |
| α-helix | 332-335 | 4 | |
| α-helix | 337-341 | 5 | |
| β-strand | 356-359 | 4 | 159 |
| β-strand | 362 | 1 | 162 |
| β-strand | 370 | 1 | 162 |
| β-strand | 387-395 | 9 | 159 |
| α-helix | 399-400 | 2 | |
| β-strand | 402-405 | 4 | 157 |
| α-helix | 407-408 | 2 | |
| β-strand | 416-421 | 6 | 157 |
| α-helix | 437-439 | 3 | |
| β-strand | 441-443 | 3 | 163 |
| β-strand | 448-450 | 3 | 163 |
| β-strand | 454-455 | 2 | 164 |
| β-strand | 461-462 | 2 | 164 |
| α-helix | 470-472 | 3 | |
| α-helix | 483-485 | 3 | |
| β-strand | 488-491 | 4 | 165 |
| β-strand | 494-497 | 4 | 165 |
| β-strand | 507-508 | 2 | 166 |
| β-strand | 514-515 | 2 | 166 |
| β-strand | 521-522 | 2 | 167 |
| β-strand | 525-526 | 2 | 167 |
| α-helix | 529-532 | 4 | |
| β-strand | 533-536 | 4 | 168 |
| β-strand | 539-542 | 4 | 168 |
| α-helix | 543 | 1 | |
| β-strand | 561 | 1 | 169 |
| β-strand | 567 | 1 | 169 |
| β-strand | 574 | 1 | 170 |
| β-strand | 579 | 1 | 170 |
| α-helix | 604-607 | 4 | |
| β-strand | 629 | 1 | 171 |
| β-strand | 640-643 | 4 | 172 |
| β-strand | 649-654 | 6 | 172 |
| β-strand | 664 | 1 | 171 |
| β-strand | 665-667 | 3 | 172 |
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| Integrin alpha-X | A, C, E, G | protein | 1095 | Homo sapiens | P20702 (AlphaFold model) |
| Integrin beta-2 | B, D, F, H | protein | 687 | Homo sapiens | P05107 (AlphaFold model) |
Sequence of entity 1 (A, C, E, G), FASTA
>3K71_1 Integrin alpha-X (chains A, C, E, G)
FNLDTEELTAFRVDSAGFGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPI
GLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECGRNMYLTGLCFLLGPTQLTQRLP
VSRQECPRQEQDIVFLIDGSGSISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQT
HFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITD
GKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDF
DALKDIQNQLKEKIFAIEGTETTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGA
FLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQV
SRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPR
GWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGV
LGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLLRTRPVL
WVGVSMQFIPAEIPRSAFECREQVVSEQTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDL
ALDPGRLSPRATFQETKNRSLSRVRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTLV
GKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSNL
ELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQGTW
STSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELP
VKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQ
EAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSV
QEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEK
YKVHGCGGLENLYFQ
Sequence of entity 2 (B, D, F, H), FASTA
>3K71_2 Integrin beta-2 (chains B, D, F, H)
QECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGCAADDIMDPT
SLAETQEDHNGGQKQLSPQKVTLYLRPGQAAAFNVTFRRAKGYPIDLYYLMDLSYSMLDD
LRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKEKECQPPF
AFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRNVTRLLVFA
TDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAV
TSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAYNKLSSRVFLDHNALPDTLKVTY
DSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVL
PQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNN
SIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKC
RCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPC
GKYISCAECLKFEKGPFGKNCSAACPGLQLSNNPVKGRTCKERDSEGCWVAYTLEQQDGM
DRYLIYVDESRECVAGPDGCGENLYFQ
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| MG | Magnesium ion | Mg | 1 |
| CA | Calcium ion | Ca | 16 |
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | C8 H15 N O6 | 15 |
Primary citation
Structure of an integrin with an alphaI domain, complement receptor type 4. Xie, C., Zhu, J., Chen, X. et al. EMBO J (2010) 29:666-679. DOI 10.1038/emboj.2009.367 · PubMed
Other PDB entries of the same protein (UniProt P20702 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 1N3Y 1.65 Å, Crystal structure of the alpha-X beta2 integrin I domain
- 4NEH 2.75 Å, An internal ligand-bound, metastable state of a leukocyte integrin, aXb2
- 4NEN 2.9 Å, An internal ligand-bound, metastable state of a leukocyte integrin, aXb2
- 5ES4 3.3 Å, Re-refinement of integrin ALPHAXBETA2 ectodomain in the closed/bent conformation
- 3K6S 3.5 Å, Structure of integrin alphaXbeta2 ectodomain
- 3K72 3.7 Å, Structure of integrin alphaX beta2
- 2LUV Structure and Binding Interface of the Cytosolic Tails of aXb2 Integrin
- 9ECM Structure of the human integrin alphaX transmembrane domain
Browse structure collections
About this viewer
MolViewer shows 3K71 directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.