4GJE: Troponin C, slow skeletal and cardiac muscles

Crystal structure of the refolded amino-terminal domain of human cardiac troponin C in complex with cadmium. Determined by X-ray diffraction at 1.6 Å resolution. Released 6 Feb 2013.

Method
X-ray diffraction
Resolution
1.6 Å
Organism
Homo sapiens
Chains
1
Atoms
766
Mol. weight
11.11 kDa
Ligands
CA, CD
Released
6 Feb 2013

Explore 4GJE in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

4GJE contains 5 α-helices and 2 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 5 helices, 2 β-strands

ElementResiduesLengthSheet
α-helix3-97
α-helix14-2512
β-strand35-3731
α-helix38-4710
α-helix54-6411
β-strand71-7331
α-helix74-8512

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Troponin C, slow skeletal and cardiac musclesAprotein89Homo sapiensP63316 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>4GJE_1 Troponin C, slow skeletal and cardiac muscles (chains A)
MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM
IDEVDEDGSGTVDFDEFLVMMVRCMKDDS

Ligands and cofactors

IDNameFormulaCopies
CACalcium ionCa2
CDCadmium ionCd7

Water and common crystallization additives (ACT) are not listed.

Primary citation

The structure of cardiac troponin C regulatory domain with bound Cd(2+) reveals a closed conformation and unique ion coordination. Zhang, X.L., Tibbits, G.F., Paetzel, M. Acta Crystallogr D Biol Crystallogr (2013) 69:722-734. DOI 10.1107/S0907444913001182 · PubMed

Other PDB entries of the same protein (UniProt P63316 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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