Functional and structural studies of MOBKL1B, a Salvador/Warts/Hippo tumor suppressor pathway, in HCV replication. Determined by X-ray diffraction at 1.95 Å resolution. Released 6 Aug 2014.
Explore 4J1V in 3D Show helices and sheets RCSB PDB PDBe
4J1V contains 26 α-helices and 10 β-strands across 6 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
| Element | Residues | Length | Sheet |
|---|---|---|---|
| α-helix | 47-48 | 2 | |
| α-helix | 53-75 | 23 | |
| α-helix | 76-78 | 3 | |
| β-strand | 88 | 1 | 1 |
| β-strand | 94 | 1 | 1 |
| β-strand | 98 | 1 | 2 |
| β-strand | 107 | 1 | 2 |
| α-helix | 111-126 | 16 | |
| α-helix | 139-141 | 3 | |
| α-helix | 144-165 | 22 | |
| α-helix | 167-172 | 6 | |
| α-helix | 176-193 | 18 | |
| α-helix | 198-201 | 4 | |
| α-helix | 202-204 | 3 | |
| α-helix | 205-211 | 7 |
| Element | Residues | Length | Sheet |
|---|---|---|---|
| α-helix | 310-312 | 3 | |
| β-strand | 313 | 1 | 1 |
| Element | Residues | Length | Sheet |
|---|---|---|---|
| α-helix | 311-313 | 3 |
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|---|---|---|---|---|
| MOB kinase activator 1A | A, C | protein | 184 | Homo sapiens | Q9H8S9 (AlphaFold model) |
| NS5A domain II peptide | E, F, G, H | protein | 20 | Hepatitis C virus | Q99IB8 |
>4J1V_1 MOB kinase activator 1A (chains A, C) EATLGSGNLRQAVMLPEGEDLNEWIAVNTVDFFNQINMLYGTITEFCTEASCPVMSAGPR YEYHWADGTNIKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTIL KRLFRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLG SKDR
>4J1V_2 NS5A domain II peptide (chains E, F, G, H) ALPAWARPDYNPPLVESWRR
| ID | Name | Formula | Copies |
|---|---|---|---|
| ZN | Zinc ion | Zn | 2 |
Seed Sequence-Matched Controls Reveal Limitations of Small Interfering RNA Knockdown in Functional and Structural Studies of Hepatitis C Virus NS5A-MOBKL1B Interaction. Chung, H.Y., Gu, M., Buehler, E. et al. J Virol (2014) 88:11022-11033. DOI 10.1128/JVI.01582-14 · PubMed
Other PDB entries of the same protein (UniProt Q9H8S9 (AlphaFold model), which also has an AlphaFold model), best resolution first:
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