6EU1: RNA Polymerase III - open DNA complex (OC-POL3)
RNA Polymerase III - open DNA complex (OC-POL3). Determined by electron microscopy at 3.4 Å resolution. Released 17 Jan 2018.
- Method
- Electron microscopy
- Resolution
- 3.4 Å
- Organisms
- Saccharomyces cerevisiae (strain ATCC 204508 / S288c), Saccharomyces cerevisiae S288c
- Chains
- 19
- Atoms
- 40,547
- Mol. weight
- 737.68 kDa
- Ligands
- MG, ZN
- Released
- 17 Jan 2018
Explore 6EU1 in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
6EU1 contains 183 α-helices and 239 β-strands across 17 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain A: 52 helices, 61 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 11 | 1 | 1 |
| β-strand | 14-17 | 4 | 2 |
| β-strand | 20 | 1 | 3 |
| α-helix | 23-26 | 4 | |
| β-strand | 32-33 | 2 | 4 |
| β-strand | 38 | 1 | 5 |
| β-strand | 52 | 1 | 5 |
| β-strand | 82-91 | 10 | 4 |
| α-helix | 98-103 | 6 | |
| β-strand | 106 | 1 | 6 |
| β-strand | 113 | 1 | 6 |
| α-helix | 117-127 | 11 | |
| α-helix | 134-147 | 14 | |
| β-strand | 153 | 1 | 7 |
| β-strand | 160 | 1 | 7 |
| β-strand | 179-180 | 2 | 8 |
| α-helix | 192-202 | 11 | |
| α-helix | 209-211 | 3 | |
| β-strand | 220-221 | 2 | 8 |
| α-helix | 224-231 | 8 | |
| β-strand | 257-263 | 7 | 4 |
| α-helix | 264 | 1 | |
| α-helix | 281-283 | 3 | |
| α-helix | 284-301 | 18 | |
| α-helix | 309-322 | 14 | |
| α-helix | 363 | 1 | |
| α-helix | 364-369 | 6 | |
| β-strand | 371-373 | 3 | 9 |
| β-strand | 376-380 | 5 | 10 |
| β-strand | 381-383 | 3 | 11 |
| β-strand | 391 | 1 | 12 |
| β-strand | 393 | 1 | 11 |
| β-strand | 394-395 | 2 | 13 |
| β-strand | 403-405 | 3 | 14 |
| β-strand | 430-434 | 5 | 14 |
| β-strand | 441-443 | 3 | 14 |
| β-strand | 463-465 | 3 | 14 |
| α-helix | 466 | 1 | |
| β-strand | 473-475 | 3 | 10 |
| α-helix | 482-484 | 3 | |
| β-strand | 485-487 | 3 | 10 |
| β-strand | 489 | 1 | 12 |
| β-strand | 492-493 | 2 | 13 |
| β-strand | 498-500 | 3 | 11 |
| β-strand | 516-518 | 3 | 10 |
| α-helix | 525-531 | 7 | |
| β-strand | 536 | 1 | 10 |
| β-strand | 542 | 1 | 15 |
| β-strand | 549 | 1 | 15 |
| α-helix | 555-558 | 4 | |
| β-strand | 571 | 1 | 16 |
| α-helix | 573-583 | 11 | |
| α-helix | 593-595 | 3 | |
| β-strand | 597 | 1 | 17 |
| β-strand | 603 | 1 | 17 |
| β-strand | 604 | 1 | 16 |
| α-helix | 607-614 | 8 | |
| β-strand | 625-628 | 4 | 18 |
| β-strand | 652-655 | 4 | 18 |
| β-strand | 659-661 | 3 | 18 |
| α-helix | 677-684 | 8 | |
| α-helix | 686-708 | 23 | |
| α-helix | 722-746 | 25 | |
| α-helix | 750-753 | 4 | |
| α-helix | 761-782 | 22 | |
| α-helix | 785-786 | 2 | |
| α-helix | 790-797 | 8 | |
| α-helix | 803-808 | 6 | |
| β-strand | 818 | 1 | 19 |
| β-strand | 821 | 1 | 19 |
| α-helix | 858-870 | 13 | |
| α-helix | 875-891 | 17 | |
| β-strand | 897-898 | 2 | 20 |
| β-strand | 904-905 | 2 | 20 |
| β-strand | 911-913 | 3 | 20 |
| α-helix | 916-918 | 3 | |
| β-strand | 921 | 1 | 21 |
| α-helix | 935-945 | 11 | |
| α-helix | 958-962 | 5 | |
| β-strand | 977 | 1 | 22 |
| β-strand | 983 | 1 | 22 |
| α-helix | 999-1025 | 27 | |
| α-helix | 1029-1030 | 2 | |
| α-helix | 1053-1059 | 7 | |
| α-helix | 1066-1079 | 14 | |
| β-strand | 1082 | 1 | 21 |
| α-helix | 1083-1084 | 2 | |
| α-helix | 1089-1094 | 6 | |
| α-helix | 1123-1131 | 9 | |
| β-strand | 1140-1145 | 6 | 23 |
| α-helix | 1156-1159 | 4 | |
| β-strand | 1164 | 1 | 24 |
| β-strand | 1170 | 1 | 25 |
| β-strand | 1172 | 1 | 26 |
| β-strand | 1186 | 1 | 27 |
| β-strand | 1188 | 1 | 25 |
| α-helix | 1190-1195 | 6 | |
| α-helix | 1204-1210 | 7 | |
| β-strand | 1230 | 1 | 27 |
| α-helix | 1237-1243 | 7 | |
| α-helix | 1251-1254 | 4 | |
| α-helix | 1260-1265 | 6 | |
| β-strand | 1273 | 1 | 24 |
| β-strand | 1280-1285 | 6 | 23 |
| β-strand | 1291-1296 | 6 | 23 |
| β-strand | 1309-1316 | 8 | 23 |
| α-helix | 1319-1325 | 7 | |
| α-helix | 1329-1344 | 16 | |
| α-helix | 1353-1358 | 6 | |
| α-helix | 1383-1386 | 4 | |
| α-helix | 1392-1401 | 10 | |
| α-helix | 1424-1426 | 3 | |
| β-strand | 1429-1432 | 4 | 28 |
Chain B: 40 helices, 68 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 47-54 | 8 | |
| α-helix | 62-67 | 6 | |
| α-helix | 68-72 | 5 | |
| α-helix | 73-76 | 4 | |
| β-strand | 83 | 1 | 29 |
| β-strand | 93 | 1 | 29 |
| β-strand | 95-100 | 6 | 30 |
| α-helix | 117-120 | 4 | |
| β-strand | 126 | 1 | 31 |
| β-strand | 129-133 | 5 | 30 |
| β-strand | 146-150 | 5 | 30 |
| β-strand | 153 | 1 | 31 |
| α-helix | 154-155 | 2 | |
| α-helix | 170-173 | 4 | |
| β-strand | 185-187 | 3 | 32 |
| β-strand | 190-192 | 3 | 32 |
| α-helix | 195 | 1 | |
| β-strand | 196 | 1 | 33 |
| β-strand | 197-198 | 2 | 34 |
| β-strand | 206 | 1 | 35 |
| α-helix | 214-215 | 2 | |
| β-strand | 218 | 1 | 35 |
| β-strand | 247 | 1 | 36 |
| α-helix | 253-259 | 7 | |
| α-helix | 268-271 | 4 | |
| α-helix | 280-283 | 4 | |
| α-helix | 284-286 | 3 | |
| α-helix | 301-306 | 6 | |
| β-strand | 309 | 1 | 36 |
| α-helix | 343-352 | 10 | |
| α-helix | 355-361 | 7 | |
| β-strand | 377-378 | 2 | 34 |
| α-helix | 380-404 | 25 | |
| α-helix | 423-436 | 14 | |
| β-strand | 444 | 1 | 37 |
| β-strand | 449 | 1 | 37 |
| β-strand | 457 | 1 | 32 |
| α-helix | 458-459 | 2 | |
| α-helix | 466-469 | 4 | |
| β-strand | 473 | 1 | 33 |
| β-strand | 512 | 1 | 33 |
| β-strand | 520 | 1 | 38 |
| α-helix | 527-536 | 10 | |
| β-strand | 556 | 1 | 39 |
| α-helix | 568-579 | 12 | |
| β-strand | 591-592 | 2 | 39 |
| β-strand | 599-600 | 2 | 39 |
| β-strand | 608 | 1 | 38 |
| β-strand | 611-614 | 4 | 40 |
| β-strand | 615 | 1 | 41 |
| β-strand | 620 | 1 | 41 |
| α-helix | 624-630 | 7 | |
| α-helix | 638-641 | 4 | |
| β-strand | 646-648 | 3 | 40 |
| α-helix | 654-656 | 3 | |
| β-strand | 659-660 | 2 | 40 |
| β-strand | 672-673 | 2 | 40 |
| α-helix | 685-687 | 3 | |
| α-helix | 696-706 | 11 | |
| β-strand | 724-728 | 5 | 42 |
| β-strand | 736-737 | 2 | 43 |
| β-strand | 753-759 | 7 | 44 |
| β-strand | 772-774 | 3 | 44 |
| α-helix | 775-778 | 4 | |
| β-strand | 785-790 | 6 | 42 |
| β-strand | 793-794 | 2 | 45 |
| β-strand | 797 | 1 | 46 |
| β-strand | 803 | 1 | 46 |
| β-strand | 835-836 | 2 | 42 |
| β-strand | 841 | 1 | 47 |
| β-strand | 846-848 | 3 | 48 |
| β-strand | 866-868 | 3 | 48 |
| β-strand | 872 | 1 | 47 |
| β-strand | 879-881 | 3 | 42 |
| β-strand | 885-886 | 2 | 45 |
| β-strand | 895-897 | 3 | 45 |
| β-strand | 899-904 | 6 | 42 |
| β-strand | 911 | 1 | 49 |
| β-strand | 912 | 1 | 50 |
| β-strand | 921 | 1 | 49 |
| β-strand | 925-926 | 2 | 44 |
| α-helix | 938-940 | 3 | |
| β-strand | 942-944 | 3 | 44 |
| α-helix | 946-948 | 3 | |
| α-helix | 957-970 | 14 | |
| β-strand | 974-975 | 2 | 43 |
| α-helix | 988-994 | 7 | |
| β-strand | 1001-1002 | 2 | 44 |
| α-helix | 1012-1013 | 2 | |
| β-strand | 1017-1024 | 8 | 44 |
| β-strand | 1026 | 1 | 50 |
| α-helix | 1031-1034 | 4 | |
| β-strand | 1036-1038 | 3 | 10 |
| β-strand | 1043 | 1 | 51 |
| α-helix | 1049 | 1 | |
| β-strand | 1050 | 1 | 51 |
| α-helix | 1051-1052 | 2 | |
| β-strand | 1060-1062 | 3 | 9 |
| α-helix | 1064-1073 | 10 | |
| α-helix | 1077-1080 | 4 | |
| α-helix | 1081-1085 | 5 | |
| β-strand | 1090-1095 | 6 | 52 |
| β-strand | 1101-1102 | 2 | 52 |
| β-strand | 1116-1121 | 6 | 52 |
| α-helix | 1123-1135 | 13 | |
| β-strand | 1137 | 1 | 3 |
| β-strand | 1140-1142 | 3 | 2 |
| β-strand | 1145 | 1 | 1 |
Chain C: 9 helices, 18 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 4-7 | 4 | 53 |
| β-strand | 12-13 | 2 | 53 |
| α-helix | 35-38 | 4 | |
| β-strand | 42-44 | 3 | 53 |
| β-strand | 54-57 | 4 | 53 |
| α-helix | 63-71 | 9 | |
| β-strand | 76-85 | 10 | 54 |
| α-helix | 96-102 | 7 | |
| β-strand | 106 | 1 | 55 |
| α-helix | 122-124 | 3 | |
| β-strand | 132-139 | 8 | 54 |
| β-strand | 142 | 1 | 56 |
| β-strand | 157 | 1 | 56 |
| β-strand | 161-162 | 2 | 57 |
| α-helix | 164-166 | 3 | |
| β-strand | 168-169 | 2 | 54 |
| β-strand | 186 | 1 | 55 |
| β-strand | 194-195 | 2 | 57 |
| β-strand | 201-212 | 12 | 54 |
| α-helix | 217-219 | 3 | |
| β-strand | 229-235 | 7 | 53 |
| α-helix | 243-247 | 5 | |
| β-strand | 256-257 | 2 | 58 |
| β-strand | 266-267 | 2 | 58 |
| α-helix | 278-280 | 3 | |
| β-strand | 289-300 | 12 | 53 |
| α-helix | 310-329 | 20 | |
Chain D: 8 helices, 1 β-strand
| Element | Residues | Length | Sheet |
|---|
| β-strand | 3 | 1 | 59 |
| α-helix | 14-21 | 8 | |
| α-helix | 33-36 | 4 | |
| α-helix | 53-61 | 9 | |
| α-helix | 100-108 | 9 | |
| α-helix | 109-112 | 4 | |
| α-helix | 117-125 | 9 | |
| α-helix | 131-137 | 7 | |
| α-helix | 147-157 | 11 | |
Chain E: 13 helices, 11 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 3-25 | 23 | |
| β-strand | 28 | 1 | 60 |
| α-helix | 32-35 | 4 | |
| α-helix | 40-46 | 7 | |
| β-strand | 47 | 1 | 61 |
| α-helix | 52 | 1 | |
| β-strand | 53 | 1 | 61 |
| α-helix | 54 | 1 | |
| α-helix | 55-57 | 3 | |
| α-helix | 62-63 | 2 | |
| β-strand | 64 | 1 | 60 |
| α-helix | 68-71 | 4 | |
| β-strand | 79-82 | 4 | 62 |
| α-helix | 94-99 | 6 | |
| β-strand | 108-111 | 4 | 62 |
| α-helix | 120-122 | 3 | |
| α-helix | 138-140 | 3 | |
| β-strand | 153-155 | 3 | 63 |
| α-helix | 158-167 | 10 | |
| β-strand | 177-178 | 2 | 64 |
| α-helix | 183-188 | 6 | |
| β-strand | 196-198 | 3 | 63 |
| β-strand | 210-212 | 3 | 63 |
| β-strand | 213-214 | 2 | 64 |
Chain F: 5 helices, 4 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 73-75 | 3 | |
| β-strand | 84 | 1 | 65 |
| α-helix | 88-102 | 15 | |
| α-helix | 105-107 | 3 | |
| α-helix | 117-127 | 11 | |
| β-strand | 132-135 | 4 | 28 |
| β-strand | 145-147 | 3 | 28 |
| α-helix | 148-150 | 3 | |
| β-strand | 152 | 1 | 65 |
Chain G: 4 helices, 14 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 3-4 | 2 | 28 |
| β-strand | 7 | 1 | 59 |
| β-strand | 8-13 | 6 | 28 |
| α-helix | 22-30 | 9 | |
| α-helix | 37-38 | 2 | |
| β-strand | 39 | 1 | 66 |
| β-strand | 43 | 1 | 66 |
| β-strand | 44-52 | 9 | 28 |
| β-strand | 57-58 | 2 | 28 |
| β-strand | 66-77 | 12 | 28 |
| β-strand | 87-92 | 6 | 67 |
| β-strand | 97-100 | 4 | 67 |
| β-strand | 108-110 | 3 | 67 |
| β-strand | 145-146 | 2 | 67 |
| β-strand | 151 | 1 | 68 |
| α-helix | 163-166 | 4 | |
| α-helix | 169-174 | 6 | |
| β-strand | 197 | 1 | 68 |
Chain H: 1 helix, 16 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 4 | 1 | 69 |
| β-strand | 9-14 | 6 | 70 |
| β-strand | 24-25 | 2 | 71 |
| β-strand | 27-30 | 4 | 70 |
| β-strand | 38 | 1 | 70 |
| β-strand | 41-42 | 2 | 71 |
| β-strand | 53-56 | 4 | 70 |
| β-strand | 58-60 | 3 | 69 |
| β-strand | 95-96 | 2 | 69 |
| β-strand | 97 | 1 | 17 |
| β-strand | 100-103 | 4 | 72 |
| α-helix | 105-106 | 2 | |
| β-strand | 107 | 1 | 73 |
| β-strand | 111 | 1 | 73 |
| β-strand | 114-117 | 4 | 72 |
| β-strand | 122-125 | 4 | 72 |
| β-strand | 141-144 | 4 | 69 |
9 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| DNA-directed RNA polymerase III subunit RPC1 | A | protein | 1460 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | P04051 (AlphaFold model) |
| DNA-directed RNA polymerase III subunit RPC2 | B | protein | 1149 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | P22276 (AlphaFold model) |
| DNA-directed RNA polymerases I and III subunit RPAC1 | C | protein | 335 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | P07703 (AlphaFold model) |
| DNA-directed RNA polymerase III subunit RPC9 | D | protein | 161 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | P47076 (AlphaFold model) |
| DNA-directed RNA polymerases I, II, and III subunit RPABC1 | E | protein | 215 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | P20434 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC2 | F | protein | 155 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | P20435 |
| DNA-directed RNA polymerase III subunit RPC8 | G | protein | 212 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | P35718 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC3 | H | protein | 146 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | P20436 |
| DNA-directed RNA polymerase III subunit RPC10 | I | protein | 110 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | Q04307 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 | J | protein | 70 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | P22139 |
| DNA-directed RNA polymerases I and III subunit RPAC2 | K | protein | 142 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | P28000 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC4 | L | protein | 70 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | P40422 |
7 more molecules are not listed.
Sequence of entity 1 (A), FASTA
>6EU1_1 DNA-directed RNA polymerase III subunit RPC1 (chains A)
MKEVVVSETPKRIKGLEFSALSAADIVAQSEVEVSTRDLFDLEKDRAPKANGALDPKMGV
SSSSLECATCHGNLASCHGHFGHLKLALPVFHIGYFKATIQILQGICKNCSAILLSETDK
RQFLHELRRPGVDNLRRMGILKKILDQCKKQRRCLHCGALNGVVKKAAAGAGSAALKIIH
DTFRWVGKKSAPEKDIWVGEWKEVLAHNPELERYVKRCMDDLNPLKTLNLFKQIKSADCE
LLGIDATVPSGRPETYIWRYLPAPPVCIRPSVMMQDSPASNEDDLTVKLTEIVWTSSLIK
AGLDKGISINNMMEHWDYLQLTVAMYINSDSVNPAMLPGSSNGGGKVKPIRGFCQRLKGK
QGRFRGNLSGKRVDFSGRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELI
VNGPNVHPGANYLLKRNEDARRNLRYGDRMKLAKNLQIGDVVERHLEDGDVVLFNRQPSL
HRLSILSHYAKIRPWRTFRLNECVCTPYNADFDGDEMNLHVPQTEEARAEAINLMGVKNN
LLTPKSGEPIIAATQDFITGSYLISHKDSFYDRATLTQLLSMMSDGIEHFDIPPPAIMKP
YYLWTGKQVFSLLIKPNHNSPVVINLDAKNKVFVPPKSKSLPNEMSQNDGFVIIRGSQIL
SGVMDKSVLGDGKKHSVFYTILRDYGPQEAANAMNRMAKLCARFLGNRGFSIGINDVTPA
DDLKQKKEELVEIAYHKCDELITLFNKGELETQPGCNEEQTLEAKIGGLLSKVREEVGDV
CINELDNWNAPLIMATCGSKGSTLNVSQMVAVVGQQIISGNRVPDGFQDRSLPHFPKNSK
TPQSKGFVRNSFFSGLSPPEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSCQY
DNTVRTSANGIVQFTYGGDGLDPLEMEGNAQPVNFNRSWDHAYNITFNNQDKGLLPYAIM
ETANEILGPLEERLVRYDNSGCLVKREDLNKAEYVDQYDAERDFYHSLREYINGKATALA
NLRKSRGMLGLLEPPAKELQGIDPDETVPDNVKTSVSQLYRISEKSVRKFLEIALFKYRK
ARLEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPI
INAVLVNDNDERAARVVKGRVEKTLLSDVAFYVQDVYKDNLSFIQVRIDLGTIDKLQLEL
TIEDIAVAITRASKLKIQASDVNIIGKDRIAINVFPEGYKAKSISTSAKEPSENDVFYRM
QQLRRALPDVVVKGLPDISRAVINIRDDGKRELLVEGYGLRDVMCTDGVIGSRTTTNHVL
EVFSVLGIEAARYSIIREINYTMSNHGMSVDPRHIQLLGDVMTYKGEVLGITRFGLSKMR
DSVLQLASFEKTTDHLFDAAFYMKKDAVEGVSECIILGQTMSIGTGSFKVVKGTNISEKD
LVPKRCLFESLSNEAALKAN
Sequence of entity 2 (B), FASTA
>6EU1_2 DNA-directed RNA polymerase III subunit RPC2 (chains B)
MVAATKRRKTHIHKHVKDEAFDDLLKPVYKGKKLTDEINTAQDKWHLLPAFLKVKGLVKQ
HLDSFNYFVDTDLKKIIKANQLILSDVDPEFYLKYVDIRVGKKSSSSTKDYLTPPHECRL
RDMTYSAPIYVDIEYTRGRNIIMHKDVEIGRMPIMLRSNKCILYDADESKMAKLNECPLD
PGGYFIVNGTEKVILVQEQLSKNRIIVEADEKKGIVQASVTSSTHERKSKTYVITKNGKI
YLKHNSIAEEIPIAIVLKACGILSDLEIMQLVCGNDSSYQDIFAVNLEESSKLDIYTQQQ
ALEYIGAKVKTMRRQKLTILQEGIEAIATTVIAHLTVEALDFREKALYIAMMTRRVVMAM
YNPKMIDDRDYVGNKRLELAGQLISLLFEDLFKKFNNDFKLSIDKVLKKPNRAMEYDALL
SINVHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKS
RKVSGPRALQPSQFGMLCTADTPEGEACGLVKNLALMTHITTDDEEEPIKKLCYVLGVED
ITLIDSASLHLNYGVYLNGTLIGSIRFPTKFVTQFRHLRRTGKVSEFISIYSNSHQMAVH
IATDGGRICRPLIIVSDGQSRVKDIHLRKLLDGELDFDDFLKLGLVEYLDVNEENDSYIA
LYEKDIVPSMTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQFKR
IDTLLYLMTYPQQPMVKTKTIELIDYDKLPAGQNATVAVMSYSGYDIEDALVLNKSSIDR
GFGRCETRRKTTTVLKRYANHTQDIIGGMRVDENGDPIWQHQSLGPDGLGEVGMKVQSGQ
IYINKSVPTNSADAPNPNNVNVQTQYREAPVIYRGPEPSHIDQVMMSVSDNDQALIKVLL
RQNRRPELGDKFSSRHGQKGVCGIIVKQEDMPFNDQGIVPDIIMNPHGFPSRMTVGKMIE
LISGKAGVLNGTLEYGTCFGGSKLEDMSKILVDQGFNYSGKDMLYSGITGECLQAYIFFG
PIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLL
ERLMISSDAFEVDVCDKCGLMGYSGWCTTCKSAENIIKMTIPYAAKLLFQELLSMNIAPR
LRLEDIFQQ
Sequence of entity 3 (C), FASTA
>6EU1_3 DNA-directed RNA polymerases I and III subunit RPAC1 (chains C)
MSNIVGIEYNRVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNISSLDAREANFDLINID
TSIANAFRRIMISEVPSVAAEYVYFFNNTSVIQDEVLAHRIGLVPLKVDPDMLTWVDSNL
PDDEKFTDENTIVLSLNVKCTRNPDAPKGSTDPKELYNNAHVYARDLKFEPQGRQSTTFA
DCPVVPADPDILLAKLRPGQEISLKAHCILGIGGDHAKFSPVSTASYRLLPQINILQPIK
GESARRFQKCFPPGVIGIDEGSDEAYVKDARKDTVSREVLRYEEFADKVKLGRVRNHFIF
NVESAGAMTPEEIFFKSVRILKNKAEYLKNCPITQ
Sequence of entity 4 (D), FASTA
>6EU1_4 DNA-directed RNA polymerase III subunit RPC9 (chains D)
MKVLEERNAFLSDYEVLKFLTDLEKKHLWDQKSLAALKKSRSKGKQNRPYNHPELQGITR
NVVNYLSINKNFINQEDEGEERESSGAKDAEKSGISKMSDESFAELMTKLNSFKLFKAEK
LQIVNQLPANMVHLYSIVEECDARFDEKTIEEMLEIISGYA
Sequence of entity 5 (E), FASTA
>6EU1_5 DNA-directed RNA polymerases I, II, and III subunit RPABC1 (chains E)
MDQENERNISRLWRAFRTVKEMVKDRGYFITQEEVELPLEDFKAKYCDSMGRPQRKMMSF
QANPTEESISKFPDMGSLWVEFCDEPSVGVKTMKTFVIHIQEKNFQTGIFVYQNNITPSA
MKLVPSIPPATIETFNEAALVVNITHHELVPKHIRLSSDEKRELLKRYRLKESQLPRIQR
ADPVALYLGLKRGEVVKIIRKSETSGRYASYRICM
Sequence of entity 6 (F), FASTA
>6EU1_6 DNA-directed RNA polymerases I, II, and III subunit RPABC2 (chains F)
MSDYEEAFNDGNENFEDFDVEHFSDEETYEEKPQFKDGETTDANGKTIVTGGNGPEDFQQ
HEQIRRKTLKEKAIPKDQRATTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRI
AMKELAEKKIPLVIRRYLPDGSFEDWSVEELIVDL
Sequence of entity 7 (G), FASTA
>6EU1_7 DNA-directed RNA polymerase III subunit RPC8 (chains G)
MFILSKIADLVRIPPDQFHRDTISAITHQLNNKFANKIIPNVGLCITIYDLLTVEEGQLK
PGDGSSYINVTFRAVVFKPFLGEIVTGWISKCTAEGIKVSLLGIFDDIFIPQNMLFEGCY
YTPEESAWIWPMDEETKLYFDVNEKIRFRIEREVFVDVKPKSPKERELEERAQLENEIEG
KNEETPQNEKPPAYALLGSCQTDGMGLVSWWE
Sequence of entity 8 (H), FASTA
>6EU1_8 DNA-directed RNA polymerases I, II, and III subunit RPABC3 (chains H)
MSNTLFDDIFQVSEVDPGRYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIA
SSLNLEDTPANDSSATRSWRPPQAGDRSLADDYDYVMYGTAYKFEEVSKDLIAVYYSFGG
LLMRLEGNYRNLNNLKQENAYLLIRR
Sequence of entity 9 (I), FASTA
>6EU1_9 DNA-directed RNA polymerase III subunit RPC10 (chains I)
MLSFCPSCNNMLLITSGDSGVYTLACRSCPYEFPIEGIEIYDRKKLPRKEVDDVLGGGWD
NVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVNCGHRWKEN
Sequence of entity 10 (J), FASTA
>6EU1_10 DNA-directed RNA polymerases I, II, and III subunit RPABC5 (chains J)
MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLGLKRYCCRRMILTHVDLIEKF
LRYNPLEKRD
Sequence of entity 11 (K), FASTA
>6EU1_11 DNA-directed RNA polymerases I and III subunit RPAC2 (chains K)
MTEDIEQKKTATEVTPQEPKHIQEEEEQDVDMTGDEEQEEEPDREKIKLLTQATSEDGTS
ASFQIVEEDHTLGNALRYVIMKNPDVEFCGYSIPHPSENLLNIRIQTYGETTAVDALQKG
LKDLMDLCDVVESKFTEKIKSM
Sequence of entity 12 (L), FASTA
>6EU1_12 DNA-directed RNA polymerases I, II, and III subunit RPABC4 (chains L)
MSREGFQIPTNLDAAAAGTSQARTATLKYICAECSSKLSLSRTDAVRCKDCGHRILLKAR
TKRLVQFEAR
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| MG | Magnesium ion | Mg | 1 |
| ZN | Zinc ion | Zn | 6 |
Primary citation
Structural basis of RNA polymerase III transcription initiation. Abascal-Palacios, G., Ramsay, E.P., Beuron, F. et al. Nature (2018) 553:301-306. DOI 10.1038/nature25441 · PubMed
Other PDB entries of the same protein (UniProt P04051 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 7Z0H 2.6 Å, Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.6 A (focus subunit AC40).
- 7Z1O 2.7 Å, Structure of yeast RNA Polymerase III PTC + NTPs
- 7Z31 2.76 Å, Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.7 A (focus subunit C11,…
- 7Z1L 2.8 Å, Structure of yeast RNA Polymerase III Pre-Termination Complex (PTC)
- 7Z30 2.9 Å, Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.9 A (focus subunit C11…
- 7Z2Z 3.07 Å, Structure of yeast RNA Polymerase III-DNA-Ty1 integrase complex (Pol III-DNA-IN1) at 3.1 A
- 8BWS 3.2 Å, Structure of yeast RNA Polymerase III elongation complex at 3.3 A
- 6TUT 3.25 Å, Cryo-EM structure of the RNA Polymerase III-Maf1 complex
- 6EU3 3.3 Å, Apo RNA Polymerase III - closed conformation (cPOL3)
- 6EU2 3.4 Å, Apo RNA Polymerase III - open conformation (oPOL3)
- 7Z1M 3.4 Å, Structure of yeast RNA Polymerase III Elongation Complex (EC)
- 6F40 3.7 Å, RNA Polymerase III open complex
Browse structure collections
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