6V6S: Native human gamma-tubulin ring complex
Structure of the native human gamma-tubulin ring complex. Determined by electron microscopy at 4.3 Å resolution. Released 1 Jan 2020.
- Method
- Electron microscopy
- Resolution
- 4.3 Å
- Organism
- Homo sapiens
- Chains
- 38
- Atoms
- 106,422
- Mol. weight
- 2353.97 kDa
- Ligands
- GDP, ADP
- Released
- 1 Jan 2020
Explore 6V6S in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
6V6S contains 704 α-helices and 372 β-strands across 38 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain a: 15 helices, 20 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 4-9 | 6 | 118 |
| α-helix | 11-28 | 18 | |
| β-strand | 31 | 1 | 119 |
| β-strand | 37 | 1 | 119 |
| β-strand | 52-53 | 2 | 120 |
| β-strand | 61-62 | 2 | 120 |
| β-strand | 64-66 | 3 | 118 |
| α-helix | 73-79 | 7 | |
| α-helix | 83-85 | 3 | |
| α-helix | 104-113 | 10 | |
| α-helix | 115-127 | 13 | |
| β-strand | 132-138 | 7 | 118 |
| β-strand | 140 | 1 | 121 |
| α-helix | 145-160 | 16 | |
| β-strand | 165 | 1 | 118 |
| β-strand | 167-168 | 2 | 118 |
| β-strand | 171-172 | 2 | 121 |
| α-helix | 184-195 | 12 | |
| β-strand | 201-202 | 2 | 118 |
| β-strand | 203 | 1 | 122 |
| β-strand | 205-206 | 2 | 121 |
| α-helix | 207-217 | 11 | |
| α-helix | 225-239 | 15 | |
| α-helix | 253-260 | 8 | |
| β-strand | 269 | 1 | 122 |
| β-strand | 270-273 | 4 | 123 |
| α-helix | 290-297 | 8 | |
| β-strand | 317-324 | 8 | 123 |
| α-helix | 333-343 | 11 | |
| β-strand | 348 | 1 | 123 |
| β-strand | 356-360 | 5 | 123 |
| β-strand | 376-381 | 6 | 123 |
| α-helix | 382-384 | 3 | |
| α-helix | 385-399 | 15 | |
| α-helix | 420-436 | 17 | |
Chain A: 31 helices, 6 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 233-235 | 3 | |
| α-helix | 238-252 | 15 | |
| β-strand | 262-263 | 2 | 1 |
| β-strand | 274-275 | 2 | 1 |
| α-helix | 282-288 | 7 | |
| α-helix | 292-294 | 3 | |
| α-helix | 302-305 | 4 | |
| α-helix | 319-323 | 5 | |
| α-helix | 326-343 | 18 | |
| α-helix | 349-355 | 7 | |
| α-helix | 357-369 | 13 | |
| α-helix | 382-389 | 8 | |
| α-helix | 400-410 | 11 | |
| α-helix | 415-422 | 8 | |
| β-strand | 437-439 | 3 | 2 |
| β-strand | 460-462 | 3 | 2 |
| α-helix | 472-474 | 3 | |
| α-helix | 475-489 | 15 | |
| α-helix | 513-532 | 20 | |
| α-helix | 538-545 | 8 | |
| α-helix | 570 | 1 | |
| α-helix | 576-589 | 14 | |
| α-helix | 591-593 | 3 | |
| α-helix | 598-600 | 3 | |
| β-strand | 601-603 | 3 | 3 |
| β-strand | 646-648 | 3 | 3 |
| α-helix | 652-655 | 4 | |
| α-helix | 660-662 | 3 | |
| α-helix | 664-682 | 19 | |
| α-helix | 686-690 | 5 | |
| α-helix | 708-725 | 18 | |
| α-helix | 726-730 | 5 | |
| α-helix | 731-740 | 10 | |
| α-helix | 747-764 | 18 | |
| α-helix | 775-790 | 16 | |
| α-helix | 850-867 | 18 | |
| α-helix | 884-887 | 4 | |
Chains b, d and f: 17 helices, 22 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 4-9 | 6 | 124 |
| α-helix | 11-28 | 18 | |
| β-strand | 31 | 1 | 125 |
| β-strand | 37 | 1 | 125 |
| β-strand | 52-53 | 2 | 126 |
| β-strand | 61-62 | 2 | 126 |
| β-strand | 64-66 | 3 | 124 |
| α-helix | 73-78 | 6 | |
| α-helix | 83-85 | 3 | |
| α-helix | 104-113 | 10 | |
| α-helix | 115-127 | 13 | |
| β-strand | 132-138 | 7 | 124 |
| β-strand | 140 | 1 | 127 |
| α-helix | 145-160 | 16 | |
| β-strand | 165-168 | 4 | 124 |
| β-strand | 171-172 | 2 | 127 |
| α-helix | 184-195 | 12 | |
| β-strand | 201-202 | 2 | 124 |
| β-strand | 203 | 1 | 128 |
| β-strand | 205-206 | 2 | 127 |
| α-helix | 207-213 | 7 | |
| α-helix | 214-218 | 5 | |
| α-helix | 225-239 | 15 | |
| α-helix | 241-244 | 4 | |
| α-helix | 253-260 | 8 | |
| β-strand | 269 | 1 | 128 |
| β-strand | 270 | 1 | 129 |
| β-strand | 272 | 1 | 130 |
| β-strand | 273 | 1 | 129 |
| α-helix | 290-297 | 8 | |
| β-strand | 303 | 1 | 130 |
| β-strand | 317-324 | 8 | 129 |
| α-helix | 333-343 | 11 | |
| β-strand | 348 | 1 | 129 |
| β-strand | 356-360 | 5 | 129 |
| β-strand | 376-381 | 6 | 129 |
| α-helix | 382-384 | 3 | |
| α-helix | 385-399 | 15 | |
| α-helix | 420-438 | 19 | |
Chain B: 29 helices, 6 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 247-257 | 11 | |
| β-strand | 266 | 1 | 11 |
| β-strand | 277 | 1 | 11 |
| α-helix | 285-310 | 26 | |
| α-helix | 320-325 | 6 | |
| α-helix | 330-344 | 15 | |
| α-helix | 364-370 | 7 | |
| α-helix | 377-387 | 11 | |
| α-helix | 394-397 | 4 | |
| α-helix | 415-430 | 16 | |
| β-strand | 448-450 | 3 | 12 |
| β-strand | 464-466 | 3 | 12 |
| α-helix | 480-495 | 16 | |
| α-helix | 529-551 | 23 | |
| α-helix | 555-564 | 10 | |
| α-helix | 572-580 | 9 | |
| α-helix | 582-585 | 4 | |
| α-helix | 589-591 | 3 | |
| α-helix | 594-607 | 14 | |
| α-helix | 609-611 | 3 | |
| α-helix | 615-620 | 6 | |
| β-strand | 623-625 | 3 | 13 |
| β-strand | 638-640 | 3 | 13 |
| α-helix | 649-652 | 4 | |
| α-helix | 657-675 | 19 | |
| α-helix | 677-687 | 11 | |
| α-helix | 698-722 | 25 | |
| α-helix | 723-727 | 5 | |
| α-helix | 732-735 | 4 | |
| α-helix | 745-761 | 17 | |
| α-helix | 769-808 | 40 | |
| α-helix | 826-838 | 13 | |
| α-helix | 840-865 | 26 | |
| α-helix | 874-880 | 7 | |
| α-helix | 882-884 | 3 | |
Chains c and m: 16 helices, 22 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 4-5 | 2 | 4 |
| β-strand | 7-9 | 3 | 5 |
| α-helix | 11-28 | 18 | |
| β-strand | 31-32 | 2 | 6 |
| β-strand | 36-37 | 2 | 6 |
| β-strand | 52-53 | 2 | 7 |
| β-strand | 61-62 | 2 | 7 |
| β-strand | 64-66 | 3 | 5 |
| α-helix | 73-79 | 7 | |
| α-helix | 83-85 | 3 | |
| α-helix | 104-113 | 10 | |
| α-helix | 115-127 | 13 | |
| β-strand | 132-134 | 3 | 4 |
| β-strand | 137-138 | 2 | 5 |
| β-strand | 140 | 1 | 8 |
| α-helix | 145-160 | 16 | |
| β-strand | 165 | 1 | 4 |
| β-strand | 168 | 1 | 5 |
| β-strand | 171-172 | 2 | 8 |
| α-helix | 184-195 | 12 | |
| β-strand | 203 | 1 | 9 |
| β-strand | 205-206 | 2 | 8 |
| α-helix | 207-216 | 10 | |
| α-helix | 225-239 | 15 | |
| α-helix | 241-244 | 4 | |
| α-helix | 253-260 | 8 | |
| β-strand | 269 | 1 | 9 |
| β-strand | 270-273 | 4 | 10 |
| α-helix | 290-297 | 8 | |
| β-strand | 303 | 1 | 10 |
| β-strand | 317-324 | 8 | 10 |
| α-helix | 333-343 | 11 | |
| β-strand | 348 | 1 | 10 |
| β-strand | 356-360 | 5 | 10 |
| β-strand | 376-381 | 6 | 10 |
| α-helix | 382-384 | 3 | |
| α-helix | 385-399 | 15 | |
| α-helix | 419-438 | 20 | |
Chain C: 34 helices, 6 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 233-235 | 3 | |
| α-helix | 238-254 | 17 | |
| β-strand | 262-263 | 2 | 21 |
| β-strand | 274-275 | 2 | 21 |
| α-helix | 282-288 | 7 | |
| α-helix | 292-294 | 3 | |
| α-helix | 302-305 | 4 | |
| α-helix | 311-313 | 3 | |
| α-helix | 319-322 | 4 | |
| α-helix | 326-334 | 9 | |
| α-helix | 336-341 | 6 | |
| α-helix | 349-355 | 7 | |
| α-helix | 357-362 | 6 | |
| α-helix | 366-369 | 4 | |
| α-helix | 382-389 | 8 | |
| α-helix | 401-408 | 8 | |
| α-helix | 413-419 | 7 | |
| β-strand | 437-438 | 2 | 22 |
| β-strand | 461-462 | 2 | 22 |
| α-helix | 472-474 | 3 | |
| α-helix | 479-489 | 11 | |
| α-helix | 513-532 | 20 | |
| α-helix | 538-548 | 11 | |
| α-helix | 556-559 | 4 | |
| α-helix | 570 | 1 | |
| α-helix | 576-589 | 14 | |
| α-helix | 591-593 | 3 | |
| α-helix | 598-600 | 3 | |
| β-strand | 601-604 | 4 | 23 |
| β-strand | 645-648 | 4 | 23 |
| α-helix | 653-656 | 4 | |
| α-helix | 664-682 | 19 | |
| α-helix | 686-690 | 5 | |
| α-helix | 708-725 | 18 | |
| α-helix | 726-730 | 5 | |
| α-helix | 731-740 | 10 | |
| α-helix | 747-764 | 18 | |
| α-helix | 775-790 | 16 | |
| α-helix | 847-869 | 23 | |
| α-helix | 882-887 | 6 | |
Chain D: 31 helices, 6 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 247-257 | 11 | |
| β-strand | 266 | 1 | 30 |
| β-strand | 277 | 1 | 30 |
| α-helix | 285-295 | 11 | |
| α-helix | 298-310 | 13 | |
| α-helix | 320-326 | 7 | |
| α-helix | 330-346 | 17 | |
| α-helix | 364-370 | 7 | |
| α-helix | 377-387 | 11 | |
| α-helix | 394-397 | 4 | |
| α-helix | 415-418 | 4 | |
| α-helix | 423-430 | 8 | |
| β-strand | 448-450 | 3 | 31 |
| β-strand | 464-466 | 3 | 31 |
| α-helix | 480-495 | 16 | |
| α-helix | 529-551 | 23 | |
| α-helix | 555-564 | 10 | |
| α-helix | 572-580 | 9 | |
| α-helix | 582-585 | 4 | |
| α-helix | 589-591 | 3 | |
| α-helix | 594-607 | 14 | |
| α-helix | 609-611 | 3 | |
| α-helix | 615-620 | 6 | |
| β-strand | 623-625 | 3 | 32 |
| β-strand | 638-640 | 3 | 32 |
| α-helix | 649-652 | 4 | |
| α-helix | 657-675 | 19 | |
| α-helix | 677-687 | 11 | |
| α-helix | 698-722 | 25 | |
| α-helix | 723-727 | 5 | |
| α-helix | 732-735 | 4 | |
| α-helix | 745-761 | 17 | |
| α-helix | 769-808 | 40 | |
| α-helix | 826-838 | 13 | |
| α-helix | 840-865 | 26 | |
| α-helix | 874-880 | 7 | |
| α-helix | 882-884 | 3 | |
Chain e: 16 helices, 20 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 4-9 | 6 | 24 |
| α-helix | 11-28 | 18 | |
| β-strand | 31 | 1 | 25 |
| β-strand | 37 | 1 | 25 |
| β-strand | 52-53 | 2 | 26 |
| β-strand | 61-62 | 2 | 26 |
| β-strand | 64-66 | 3 | 24 |
| α-helix | 73-79 | 7 | |
| α-helix | 83-85 | 3 | |
| α-helix | 104-113 | 10 | |
| α-helix | 115-128 | 14 | |
| β-strand | 132-138 | 7 | 24 |
| β-strand | 140 | 1 | 27 |
| α-helix | 145-160 | 16 | |
| β-strand | 165 | 1 | 24 |
| β-strand | 167-168 | 2 | 24 |
| β-strand | 171-172 | 2 | 27 |
| α-helix | 184-195 | 12 | |
| β-strand | 201-202 | 2 | 24 |
| β-strand | 203 | 1 | 28 |
| β-strand | 205-206 | 2 | 27 |
| α-helix | 207-217 | 11 | |
| α-helix | 225-239 | 15 | |
| α-helix | 241-244 | 4 | |
| α-helix | 253-260 | 8 | |
| β-strand | 269 | 1 | 28 |
| β-strand | 270-273 | 4 | 29 |
| α-helix | 290-297 | 8 | |
| β-strand | 317-324 | 8 | 29 |
| α-helix | 333-343 | 11 | |
| β-strand | 348 | 1 | 29 |
| β-strand | 356-360 | 5 | 29 |
| β-strand | 376-381 | 6 | 29 |
| α-helix | 382-384 | 3 | |
| α-helix | 385-399 | 15 | |
| α-helix | 420-436 | 17 | |
27 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| Gamma-tubulin complex component 2 | A, C, E, G, M | protein | 930 | Homo sapiens | Q9BSJ2 (AlphaFold model) |
| Gamma-tubulin complex component 3 | B, D, F, H, T | protein | 907 | Homo sapiens | Q96CW5 (AlphaFold model) |
| Gamma-tubulin complex component 4 | I, K | protein | 667 | Homo sapiens | Q9UGJ1 (AlphaFold model) |
| Gamma-tubulin complex component 5 | J | protein | 1024 | Homo sapiens | Q96RT8 (AlphaFold model) |
| Gamma-tubulin complex component 6 | L | protein | 1819 | Homo sapiens | Q96RT7 |
| Unassigned poly-alanine chain ("staple") | N, O, Q, R, S | protein | 50 | Homo sapiens | |
| beta actin | U | protein | 374 | Homo sapiens | |
| Unassigned poly-alanine model ("CC") | V, Y | protein | 66 | Homo sapiens | |
| Unassigned poly-alanine model ("HB") | W | protein | 165 | Homo sapiens | |
| Unassigned poly-alanine model ("Lumenal bridge helical bundles") | X | protein | 263 | Homo sapiens | |
| Tubulin gamma-1 chain | a, b, c, d, e, f, g, h, i, j, k, l, m, t | protein | 451 | Homo sapiens | P23258 |
Sequence of entity 1 (A, C, E, G, M), FASTA
>6V6S_1 Gamma-tubulin complex component 2 (chains A, C, E, G, M)
MSEFRIHHDVNELLSLLRVHGGDGAEVYIDLLQKNRTPYVTTTVSAHSAKVKIAEFSRTP
EDFLKKYDELKSKNTRNLDPLVYLLSKLTEDKETLQYLQQNAKERAELAAAAVGSSTTSI
NVPAAASKISMQELEELRKQLGSVATGSTLQQSLELKRKMLRDKQNKKNSGQHLPIFPAW
VYERPALIGDFLIGAGISTDTALPIVLLRWNLALSPRLKCSGVISAHCNLHLPGTLPLAS
QESAVVEDLLYVLVGVDGRYVSAQPLAGRQSRTFLVDPNLDLSIRELVHRILPVAASYSA
VTRFIEEKSSFEYGQVNHALAAAMRTLVKEHLILVSQLEQLHRQGLLSLQKLWFYIQPAM
RTMDILASLATSVDKGECLGGSTLSLLHDRSFSYTGDSQAQELCLYLTKAASAPYFEVLE
KWIYRGIIHDPYSEFMVEEHELRKERIQEDYNDKYWDQRYTIVQQQIPSFLQKMADKILS
TGKYLNVVRECGHDVTCPVAKEIIYTLKERAYVEQIEKAFNYASKVLLDFLMEEKELVAH
LRSIKRYFLMDQGDFFVHFMDLAEEELRKPVEDITPPRLEALLELALRMSTANTDPFKDD
LKIDLMPHDLITQLLRVLAIETKQEKAMAHADPTELALSGLEAFSFDYIVKWPLSLIINR
KALTRYQMLFRHMFYCKHVERQLCSVWISNKTAKQHSLHSAQWFAGAFTLRQRMLNFVQN
IQYYMMFEVMEPTWHILEKNLKSASNIDDVLGHHTGFLDTCLKDCMLTNPELLKVFSKLM
SVCVMFTNCMQKFTQSMKLDGELGGQTLEHSTVLGLPAGAEERARKELARKHLAEHADTV
QLVSGFEATINKFDKNFSAHLLDLLARLSIYSTSDCEHGMASVISRLDFNGFYTERLERL
SAERSQKATPQVPVLRGPPAPAPRVAVTAQ
Sequence of entity 2 (B, D, F, H, T), FASTA
>6V6S_2 Gamma-tubulin complex component 3 (chains B, D, F, H, T)
MATPDQKSPNVLLQNLCCRILGRSEADVAQQFQYAVRVIGSNFAPTVERDEFLVAEKIKK
ELIRQRREADAALFSELHRKLHSQGVLKNKWSILYLLLSLSEDPRRQPSKVSSYATLFAQ
ALPRDAHSTPYYYARPQTLPLSYQDRSAQSAQSSGSVGSSGISSIGLCALSGPAPAPQSL
LPGQSNQAPGVGDCLRQQLGSRLAWTLTANQPSSQATTSKGVPSAVSRNMTRSRREGDTG
GTMEITEAALVRDILYVFQGIDGKNIKMNNTENCYKVEGKANLSRSLRDTAVRLSELGWL
HNKIRRYTDQRSLDRSFGLVGQSFCAALHQELREYYRLLSVLHSQLQLEDDQGVNLGLES
SLTLRRLLVWTYDPKIRLKTLAALVDHCQGRKGGELASAVHAYTKTGDPYMRSLVQHILS
LVSHPVLSFLYRWIYDGELEDTYHEFFVASDPTVKTDRLWHDKYTLRKSMIPSFMTMDQS
RKVLLIGKSINFLHQVCHDQTPTTKMIAVTKSAESPQDAADLFTDLENAFQGKIDAAYFE
TSKYLLDVLNKKYSLLDHMQAMRRYLLLGQGDFIRHLMDLLKPELVRPATTLYQHNLTGI
LETAVRATNAQFDSPEILRRLDVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHY
LRVFNFLWRAKRMEYILTDIRKGHMCNAKLLRNMPEFSGVLHQCHILASEMVHFIHQMQY
YITFEVLECSWDELWNKVQQAQDLDHIIAAHEVFLDTIISRCLLDSDSRALLNQLRAVFD
QIIELQNAQDAIYRAALEELQRRLQFEEKKKQREIEGQWGVTAAEEEEENKRIGEFKESI
PKMCSQLRILTHFYQGIVQQFLVLLTTSSDESLRFLSFRLDFNEHYKAREPRLRVSLGTR
GRRSSHT
Sequence of entity 3 (I, K), FASTA
>6V6S_3 Gamma-tubulin complex component 4 (chains I, K)
MIHELLLALSGYPGSIFTWNKRSGLQVSQDFPFLHPSETSVLNRLCRLGTDYIRFTEFIE
QYTGHVQQQDHHPSQQGQGGLHGIYLRAFCTGLDSVLQPYRQALLDLEQEFLGDPHLSIS
HVNYFLDQFQLLFPSVMVVVEQIKSQKIHGCQILETVYKHSCGGLPPVRSALEKILAVCH
GVMYKQLSAWMLHGLLLDQHEEFFIKQGPSSGNVSAQPEEDEEDLGIGGLTGKQLRELQD
LRLIEEENMLAPSLKQFSLRVEILPSYIPVRVAEKILFVGESVQMFENQNVNLTRKGSIL
KNQEDTFAAELHRLKQQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDF
YLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEY
HGKEHKADATQAREGPSRETSPREAPASGWAALGLSYKVQWPLHILFTPAVLEKYNVVFK
YLLSVRRVQAELQHCWALQMQRKHLKSNQTDAIKWRLRNHMAFLVDNLQYYLQVDVLESQ
FSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHSFCSLVSQN
LGPLDERGAAQLSILVKGFSRQSSLLFKILSSVRNHQINSDLAQLLLRLDYNKYYTQAGG
TLGSFGM
Sequence of entity 4 (J), FASTA
>6V6S_4 Gamma-tubulin complex component 5 (chains J)
MARHGPPWSRLDAQQERDVRELVRGVAGLQDEADPNFQLALNFAWSNFRFHRFLDVNSHK
IEKTIEGIYEKFVIHSDLSKAASWKRLTEEFLNAPLPSIKEIKTDAHYSILSLLLCLSDS
PSNSSYVETPRNKEVEKKDDFDWGKYLMEDEEMDIGPYMDTPNWSEESEEENDQQPLSRE
DSGIQVDRTPLEEQDQNRKLDPCISWKDEPDDRSWLEHHVVHQYWTARPSQFPHSLHLHS
NLAAVWDQHLYSSDPLYVPDDRVLVTETQVIRETLWLLSGVKKLFIFQLIDGKVTVRNNI
IVTHLTHSCLRSVLEQIAAYGQVVFRLQEFIDEVMGHSSESMLPGSGSVPKKSTEAPFRT
YQAFMWALYKYFISFKEELAEIEKCIINNDTTITLAIVVDKLAPRLSQLKVLHKVFSTGV
AEVPPDTRNVVRASHLLNTLYKAILEYDNVGEASEQTVSLLFSLWVETVRPYLQTVDEWI
VHGHLWDGAREFIIQRNKNVPVNHRDFWYATYTLYSVSEKTENEEKMSDNASASSGSDQG
PSSRQHTMVSFLKPVLKQIIMAGKSMQLLKNLQCAESTTCQAGARDAERKSLYTLFLESV
QSRLRHGEDSTPQVLTEQQATKENLMKMQSIAESHLELDDVHDPLLAINFARMYLEQSDF
HEKFAGGDVCVDRSSESVTCQTFELTLRSCLYPHIDKQYLDCCGNLMQTLKKDYRLVEYL
QAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQEAVGQRYPEDSSRLSIS
FENVDTAKKKLPVHILDGLTLSYKVPWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDV
LLFGELVSTAEKPRLKEGLIHEQDTVAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNY
IMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNL
ALMFADGWQAGLGTWRMESIEKMESDFKNCHMFLVTILNKAVCRGSFPHLESLALSLMAG
MEQS
Sequence of entity 5 (L), FASTA
>6V6S_5 Gamma-tubulin complex component 6 (chains L)
MASITQLFDDLCEALLPAAKTHLGQRSVNRKRAKRSLKKVAYNALFTNLFQDETQQLQPD
MSKLPARNKILMLSFDLRVGGLGPKADRLEELVEELEAAPCCPLLEVGSVLDLLVQLAGS
GPPQVLPRKRDYFLNNKHVGRNVPYSGYDCDDLSVFEMDVQSLISREECLCHSMIQETLQ
VMEAAPGTGLPTVGLFSFGDPCGDRFERDTRVSLFGALVHSRTYDMDVRLGLPPVPDNAD
LSGLAIKVPPSVDQWEDEGFQSASNLTPDSQSEPSVTPDVDLWEAALTYEASKRRCWERV
GCPPGHREEPYLTEAGRDAFDKFCRLHQGELQLLAGGVLQAPQPVLVKECELVKDVLNVL
IGVVSATFSLCQPAQAFVVKRGVHVSGASPESISSLLSEVAEYGTCYTRLSHFSLQPVLD
SLYSKGLVFQAFTSGLRRYLQYYRACVLSTPPTLSLLTIGFLFKKLGRQLRYLAELCGVG
AVLPGTCGGGPRAAFPTGVKLLSYLYQEALHNCSNEHYPVLLSLLKTSCEPYTRFIHDWV
YSGVFRDAYGEFMIQVNHEYLSFRDKLYWTHGYVLISKEVEDCVPVFLKHIAHDIYVCGK
TINLLKLCCPRHYLCWSDVPVPRISVIFSLEELKEIEKDCAVYVGRMERVARHSSVSKEE
KELRMEIAKQELIAHAREAASRVLSALSDRQMSERMALDARKREQFQRLKEQFVKDQERR
QAARQEELDDDFSYARELRDRERRLKSLEEELERKARQALVDHYSKLSAEAARREQKALW
RIQRHRLESARLRFLLEDEKHIQEMLKAVSEAHQPQEPPDVLLSVHPQVTSPGPEHPEGG
QGCDSGSAEQHSPAWDGWNRPGLLTPQPLKPLAVGAGGRGLQQAEGARPFSDSLSIGDFL
PVGPGAEPSVQTGMVPLLEVALQTINLDLPPSAPGEAPAAASTQPSRPQEYDFSTVLRPA
VATSPAPGPLQAAECSLGSSGLQLWEDSCGKMDACGSASRETLLPSHPPRRAALEEGSSQ
PTERLFGQVSGGGLPTGDYASEIAPTRPRWNTHGHVSDASIRVGENVSDVAPTQPRWNTH
GHVSNASISLGESVSDVAPTRPRWNIHGHVSNASIRVGENVSDVAPTRPRWNTHGHVSNA
SIRVGENVSDVAPTRPRWNTHGHVSDASISLGESVSDMAPARPRWNTHGHVSDASISLGE
SVSDMAPTRPRWNTHGHVSDTSIRVGENVSDVAPIRSRCNTHGHVSDASISLGEPVSDVV
STRPRWNTHVPIPPPHMVLGALSPEAEPNTPRPQQSPPGHTSQSALSLGAQSTVLDCGPR
LPVEVGPSLSSPSSGCGEGSISVGENVSDVAPTQPWWPNTPGDSVSEELGPGRSGDTEDL
SPNWPLNSQEDTAAQSSPGRGEEAEASAAEAQGGEQAYLAGLAGQYHLERYPDSYESMSE
PPIAHLLRPVLPRAFAFPVDPQVQSAADETAVQLSELLTLPVLMKRSITAPLAAHISLVN
KAAVDYFFVELHLEAHYEALRHFLLMEDGEFAQSLSDLLFEKLGAGQTPGELLNPLVLNS
VLSKALQCSLHGDTPHASNLSLALKYLPEVFAPNAPDVLSCLELRYKVDWPLNIVITEGC
VSKYSGVFSFLLQLKLMMWALKDVCFHLKRTALLSHMAGSVQFRQLQLFKHEMQHFVKVI
QGYIANQILHVTWCEFRARLATVGDLEEIQRAHAEYLHKAVFRGLLTEKAAPVMNVIHSI
FSLVLKFRSQLISQAWGPPGGPRGAEHPNFALMQQSYNTFKYYSHFLFKVVTKLVNRGYQ
PHLEDFLLRINFNNYYQDA
Sequence of entity 6 (N, O, Q, R, S), FASTA
>6V6S_6 Unassigned poly-alanine chain ("staple") (chains N, O, Q, R, S)
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSequence of entity 7 (U), FASTA
>6V6S_7 beta actin (chains U)
DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
GRDLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE
LKDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
YDESGPSIVHRKCF
Sequence of entity 8 (V, Y), FASTA
>6V6S_8 Unassigned poly-alanine model ("CC") (chains V, Y)
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXSequence of entity 9 (W), FASTA
>6V6S_9 Unassigned poly-alanine model ("HB") (chains W)
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSequence of entity 10 (X), FASTA
>6V6S_10 Unassigned poly-alanine model ("Lumenal bridge helical bundles") (chains X)
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXSequence of entity 11 (a, b, c, d, e, f, g, h, i, j, k, l, m, t), FASTA
>6V6S_11 Tubulin gamma-1 chain (chains a, b, c, d, e, f, g, h, i, j, k, l, m, t)
MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFATEGTDRKDVFFYQADDEHY
IPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFD
IIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSD
VVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST
TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQP
KNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVAL
SRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFKDNFDE
MDTSREIVQQLIDEYHAATRPDYISWGTQEQ
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| GDP | Guanosine-5'-diphosphate | C10 H15 N5 O11 P2 | 14 |
| ADP | Adenosine-5'-diphosphate | C10 H15 N5 O10 P2 | 1 |
Primary citation
Asymmetric Molecular Architecture of the Human gamma-Tubulin Ring Complex. Wieczorek, M., Urnavicius, L., Ti, S.C. et al. Cell (2020) 180:165-175.e16. DOI 10.1016/j.cell.2019.12.007 · PubMed
Other PDB entries of the same protein (UniProt Q9BSJ2 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 8RX1 3.57 Å, CryoEM structure of the gTuRC-CM1dim complex
- 9SMX 3.67 Å, CM1-activated gTuRC in complex with nascent alpha-E254D mutant microtubules
- 8Q62 3.72 Å, Early closed conformation of the g-tubulin ring complex
- 6V6B 3.8 Å, Structures of GCP2 and GCP3 in the native human gamma-tubulin ring complex
- 7AS4 4.13 Å, Recombinant human gTuRC
- 6X0V 4.5 Å, Structure of MZT2/GCP-NHD and CDK5Rap2 at position 13 of the gamma-TuRC
- 9H9P 4.5 Å, Spokes 12 and 13 of the human gamma-tubulin ring complex in complex with CDK5RAP2 and…
- 9QVN 4.7 Å, Cryo-EM reconstruction of the NEDD1 anchor protein bound to the gamma-tubulin ring complex
- 7QJ0 5.32 Å, Structure of recombinant human gamma-Tubulin Ring Complex 6-spoked assembly intermediate…
- 9QVM 6.8 Å, Cryo-EM reconstruction of the NEDD1 anchor protein and CDK5RAP2 bound to the…
- 7QJ1 7.0 Å, Structure of the recombinant human gamma-Tubulin Ring Complex 6-spoked assembly…
- 8VRD 7.0 Å, Rigid body fitted model for free recombinant gamma tubulin ring complex.
Browse structure collections
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