6YI2: DNA helicase

UvrD helicase RNA polymerase interactions are governed by UvrDs carboxy terminal Tudor domain. Determined by solution NMR. Released 21 Oct 2020.

Method
Solution NMR
Organism
Escherichia coli
Chains
1
Atoms
593
Mol. weight
8.45 kDa
Released
21 Oct 2020

Explore 6YI2 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

6YI2 contains 3 α-helices and 5 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 3 helices, 5 β-strands

ElementResiduesLengthSheet
β-strand675-67841
β-strand682-69091
α-helix693-6953
β-strand697-70261
β-strand707-71151
α-helix712-7154
α-helix7171
β-strand718-71921

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
DNA helicaseAprotein76Escherichia coliP03018 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>6YI2_1 DNA helicase (chains A)
RLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG
QGIKWLVAAYARLESV

Primary citation

UvrD helicase-RNA polymerase interactions are governed by UvrD's carboxy-terminal Tudor domain. Kawale, A.A., Burmann, B.M. Commun Biol (2020) 3:607-607. DOI 10.1038/s42003-020-01332-2 · PubMed

Other PDB entries of the same protein (UniProt P03018 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

About this viewer

MolViewer shows 6YI2 directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.