PanDDA analysis group deposition -- Crystal Structure of MAP1LC3B in complex with Z287121492. Determined by X-ray diffraction at 1.77 Å resolution. Released 4 Sept 2024.
Explore 7GAK in 3D Show helices and sheets RCSB PDB PDBe
7GAK contains 5 α-helices and 7 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
| Element | Residues | Length | Sheet |
|---|---|---|---|
| α-helix | 7-10 | 4 | |
| α-helix | 13-26 | 14 | |
| β-strand | 30-37 | 8 | 1 |
| α-helix | 45-47 | 3 | |
| β-strand | 51-55 | 5 | 1 |
| β-strand | 59 | 1 | 2 |
| α-helix | 60-71 | 12 | |
| β-strand | 80-83 | 4 | 1 |
| β-strand | 86-87 | 2 | 1 |
| β-strand | 94 | 1 | 2 |
| α-helix | 95-102 | 8 | |
| β-strand | 109-114 | 6 | 1 |
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|---|---|---|---|---|
| Microtubule-associated proteins 1A/1B light chain 3B | A | protein | 121 | Homo sapiens | Q9GZQ8 (AlphaFold model) |
>7GAK_1 Microtubule-associated proteins 1A/1B light chain 3B (chains A) SMPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVN MSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETF G
| ID | Name | Formula | Copies |
|---|---|---|---|
| KA3 | N-(cyclopropylmethyl)-4-methoxypiperidine-1-carboxamide | C11 H20 N2 O2 | 1 |
Water and common crystallization additives (EDO, CL) are not listed.
PanDDA analysis group deposition. Kumar, A., Knapp, S., Structural Genomics Consortium (SGC). To be published.
Other PDB entries of the same protein (UniProt Q9GZQ8 (AlphaFold model), which also has an AlphaFold model), best resolution first:
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