9CAQ: DNA replication licensing factor MCM2
Cryo-EM structure of a human MCM2-7 double hexamer formed from independently loaded MCM2-7 single hexamers. Determined by electron microscopy at 3.2 Å resolution. Released 2 Oct 2024.
- Method
- Electron microscopy
- Resolution
- 3.2 Å
- Organisms
- Homo sapiens, Saccharomyces cerevisiae
- Chains
- 14
- Atoms
- 60,375
- Mol. weight
- 1126.82 kDa
- Ligands
- MG, ZN, ADP, ATP
- Released
- 2 Oct 2024
Explore 9CAQ in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
9CAQ contains 325 α-helices and 361 β-strands across 12 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain 2: 27 helices, 29 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 182-187 | 6 | |
| α-helix | 189-205 | 17 | |
| α-helix | 214-225 | 12 | |
| β-strand | 229-233 | 5 | 1 |
| α-helix | 234-240 | 7 | |
| α-helix | 242-250 | 9 | |
| α-helix | 252-270 | 19 | |
| α-helix | 272-276 | 5 | |
| β-strand | 282-286 | 5 | 1 |
| β-strand | 291 | 1 | 2 |
| β-strand | 293 | 1 | 3 |
| β-strand | 296 | 1 | 3 |
| α-helix | 299-301 | 3 | |
| β-strand | 304-315 | 12 | 2 |
| α-helix | 316-318 | 3 | |
| β-strand | 319-329 | 11 | 2 |
| β-strand | 334-340 | 7 | 2 |
| β-strand | 362-363 | 2 | 2 |
| β-strand | 369-379 | 11 | 2 |
| β-strand | 393-399 | 7 | 2 |
| β-strand | 411-419 | 9 | 2 |
| β-strand | 434 | 1 | 4 |
| β-strand | 438-446 | 9 | 2 |
| α-helix | 460-468 | 9 | |
| α-helix | 473-480 | 8 | |
| α-helix | 489-500 | 12 | |
| β-strand | 505 | 1 | 5 |
| β-strand | 513 | 1 | 5 |
| β-strand | 519-523 | 5 | 6 |
| α-helix | 529-539 | 11 | |
| β-strand | 543-547 | 5 | 6 |
| β-strand | 559-560 | 2 | 7 |
| β-strand | 563 | 1 | 8 |
| β-strand | 568 | 1 | 8 |
| β-strand | 571-572 | 2 | 7 |
| α-helix | 575-578 | 4 | |
| β-strand | 583-587 | 5 | 6 |
| α-helix | 594-606 | 13 | |
| β-strand | 608-612 | 5 | 9 |
| β-strand | 617-621 | 5 | 9 |
| β-strand | 627-630 | 4 | 6 |
| α-helix | 631-632 | 2 | |
| α-helix | 633-635 | 3 | |
| α-helix | 643-646 | 4 | |
| α-helix | 651-656 | 6 | |
| β-strand | 659-663 | 5 | 6 |
| α-helix | 669-685 | 17 | |
| α-helix | 717-725 | 9 | |
| α-helix | 726-730 | 5 | |
| β-strand | 734 | 1 | 10 |
| α-helix | 740-754 | 15 | |
| α-helix | 764-781 | 18 | |
| β-strand | 785 | 1 | 10 |
| α-helix | 788-805 | 18 | |
| α-helix | 808-817 | 10 | |
| α-helix | 819-823 | 5 | |
Chain 3: 30 helices, 30 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 5-8 | 4 | 11 |
| α-helix | 10-23 | 14 | |
| α-helix | 31-42 | 12 | |
| β-strand | 46-50 | 5 | 12 |
| α-helix | 51-57 | 7 | |
| α-helix | 59-67 | 9 | |
| α-helix | 70-87 | 18 | |
| α-helix | 89-92 | 4 | |
| β-strand | 99-103 | 5 | 12 |
| β-strand | 110-111 | 2 | 13 |
| α-helix | 113-115 | 3 | |
| β-strand | 124-134 | 11 | 13 |
| β-strand | 138-148 | 11 | 13 |
| β-strand | 153-158 | 6 | 13 |
| α-helix | 169-172 | 4 | |
| β-strand | 177 | 1 | 14 |
| α-helix | 182 | 1 | |
| β-strand | 183 | 1 | 14 |
| α-helix | 184 | 1 | |
| β-strand | 185-202 | 18 | 13 |
| β-strand | 216-222 | 7 | 13 |
| β-strand | 234-243 | 10 | 13 |
| α-helix | 245-247 | 3 | |
| β-strand | 251-252 | 2 | 15 |
| β-strand | 255 | 1 | 16 |
| β-strand | 258-267 | 10 | 13 |
| α-helix | 278-290 | 13 | |
| α-helix | 295-302 | 8 | |
| α-helix | 311-322 | 12 | |
| β-strand | 327-328 | 2 | 17 |
| β-strand | 334-335 | 2 | 17 |
| β-strand | 340-345 | 6 | 18 |
| α-helix | 351-361 | 11 | |
| β-strand | 365-368 | 4 | 18 |
| β-strand | 381-384 | 4 | 19 |
| β-strand | 391-394 | 4 | 19 |
| α-helix | 397-400 | 4 | |
| β-strand | 405-409 | 5 | 18 |
| α-helix | 411-413 | 3 | |
| α-helix | 416-421 | 6 | |
| α-helix | 423-427 | 5 | |
| β-strand | 430-434 | 5 | 20 |
| β-strand | 439-443 | 5 | 20 |
| β-strand | 447-452 | 6 | 18 |
| α-helix | 455-457 | 3 | |
| α-helix | 465-468 | 4 | |
| α-helix | 473-478 | 6 | |
| β-strand | 481-485 | 5 | 18 |
| α-helix | 491-506 | 16 | |
| α-helix | 567-575 | 9 | |
| β-strand | 581-582 | 2 | 21 |
| α-helix | 583 | 1 | |
| α-helix | 584-598 | 15 | |
| α-helix | 600-602 | 3 | |
| α-helix | 604 | 1 | |
| β-strand | 608 | 1 | 22 |
| α-helix | 615-632 | 18 | |
| β-strand | 636-637 | 2 | 21 |
| α-helix | 639-652 | 14 | |
| β-strand | 655 | 1 | 22 |
Chain 4: 29 helices, 30 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 111-114 | 4 | |
| β-strand | 126 | 1 | 23 |
| β-strand | 152 | 1 | 23 |
| β-strand | 155 | 1 | 23 |
| α-helix | 159-172 | 14 | |
| α-helix | 192-203 | 12 | |
| β-strand | 207-211 | 5 | 24 |
| α-helix | 212-218 | 7 | |
| α-helix | 220-228 | 9 | |
| α-helix | 230-247 | 18 | |
| β-strand | 259-263 | 5 | 24 |
| α-helix | 271-273 | 3 | |
| α-helix | 276-278 | 3 | |
| β-strand | 282-292 | 11 | 25 |
| α-helix | 293-295 | 3 | |
| β-strand | 298-306 | 9 | 26 |
| β-strand | 312-316 | 5 | 26 |
| β-strand | 321-324 | 4 | 27 |
| β-strand | 327 | 1 | 28 |
| β-strand | 334 | 1 | 28 |
| β-strand | 337-347 | 11 | 26 |
| β-strand | 349-356 | 8 | 25 |
| β-strand | 369-375 | 7 | 25 |
| α-helix | 376-378 | 3 | |
| β-strand | 387-397 | 11 | 25 |
| β-strand | 400 | 1 | 29 |
| β-strand | 408-409 | 2 | 29 |
| β-strand | 411 | 1 | 30 |
| β-strand | 413-422 | 10 | 25 |
| α-helix | 432-436 | 5 | |
| α-helix | 443-454 | 12 | |
| α-helix | 458-465 | 8 | |
| α-helix | 474-485 | 12 | |
| α-helix | 493-495 | 3 | |
| β-strand | 506-509 | 4 | 31 |
| α-helix | 516-526 | 11 | |
| β-strand | 530-534 | 5 | 31 |
| α-helix | 540-544 | 5 | |
| β-strand | 545-549 | 5 | 32 |
| β-strand | 556-560 | 5 | 32 |
| α-helix | 562-565 | 4 | |
| β-strand | 570-574 | 5 | 31 |
| α-helix | 581-584 | 4 | |
| α-helix | 586-593 | 8 | |
| β-strand | 595-599 | 5 | 33 |
| β-strand | 604-608 | 5 | 33 |
| β-strand | 612-617 | 6 | 31 |
| α-helix | 620-622 | 3 | |
| α-helix | 630-634 | 5 | |
| α-helix | 638-643 | 6 | |
| β-strand | 646-649 | 4 | 31 |
| α-helix | 651-653 | 3 | |
| α-helix | 656-671 | 16 | |
| α-helix | 684-696 | 13 | |
| β-strand | 701-702 | 2 | 34 |
| α-helix | 704-720 | 17 | |
| α-helix | 731-748 | 18 | |
| β-strand | 752-753 | 2 | 34 |
| α-helix | 755-767 | 13 | |
Chain 5: 23 helices, 35 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 11 | 1 | 35 |
| α-helix | 28-40 | 13 | |
| β-strand | 43 | 1 | 36 |
| β-strand | 46 | 1 | 37 |
| β-strand | 50 | 1 | 37 |
| β-strand | 53 | 1 | 36 |
| α-helix | 54-65 | 12 | |
| β-strand | 69-71 | 3 | 38 |
| α-helix | 74-80 | 7 | |
| α-helix | 82-90 | 9 | |
| α-helix | 92-110 | 19 | |
| β-strand | 125-127 | 3 | 38 |
| α-helix | 133-136 | 4 | |
| α-helix | 137-139 | 3 | |
| β-strand | 148-158 | 11 | 39 |
| β-strand | 162-172 | 11 | 16 |
| β-strand | 178 | 1 | 16 |
| β-strand | 182-183 | 2 | 16 |
| α-helix | 184-185 | 2 | |
| β-strand | 189 | 1 | 40 |
| β-strand | 191-192 | 2 | 15 |
| α-helix | 193-194 | 2 | |
| β-strand | 196 | 1 | 41 |
| β-strand | 209 | 1 | 41 |
| β-strand | 212-224 | 13 | 16 |
| β-strand | 226-230 | 5 | 39 |
| β-strand | 244-248 | 5 | 39 |
| β-strand | 262-271 | 10 | 39 |
| β-strand | 273 | 1 | 40 |
| β-strand | 292-301 | 10 | 39 |
| α-helix | 316-327 | 12 | |
| α-helix | 331-339 | 9 | |
| α-helix | 347-358 | 12 | |
| β-strand | 363-364 | 2 | 42 |
| β-strand | 370-371 | 2 | 42 |
| β-strand | 377-381 | 5 | 43 |
| α-helix | 387-397 | 11 | |
| β-strand | 401-405 | 5 | 44 |
| β-strand | 409 | 1 | 45 |
| β-strand | 412 | 1 | 45 |
| β-strand | 417-420 | 4 | 46 |
| β-strand | 427-430 | 4 | 46 |
| α-helix | 433-436 | 4 | |
| β-strand | 440-445 | 6 | 44 |
| α-helix | 447-449 | 3 | |
| α-helix | 452-461 | 10 | |
| β-strand | 467-469 | 3 | 47 |
| β-strand | 476-478 | 3 | 47 |
| β-strand | 482-484 | 3 | 44 |
| β-strand | 485-488 | 4 | 43 |
| α-helix | 497-499 | 3 | |
| α-helix | 508-511 | 4 | |
| β-strand | 516-520 | 5 | 43 |
| α-helix | 526-542 | 17 | |
| α-helix | 556-569 | 14 | |
| α-helix | 576-600 | 25 | |
| α-helix | 610-627 | 18 | |
| α-helix | 634-652 | 19 | |
Chain 6: 30 helices, 30 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 21-36 | 16 | |
| α-helix | 45-50 | 6 | |
| α-helix | 51-54 | 4 | |
| β-strand | 60-64 | 5 | 48 |
| α-helix | 65-71 | 7 | |
| α-helix | 73-81 | 9 | |
| α-helix | 83-101 | 19 | |
| β-strand | 111-115 | 5 | 48 |
| α-helix | 128-130 | 3 | |
| β-strand | 131 | 1 | 49 |
| β-strand | 135-144 | 10 | 49 |
| α-helix | 145-147 | 3 | |
| β-strand | 148-158 | 11 | 4 |
| α-helix | 163 | 1 | |
| β-strand | 164-169 | 6 | 4 |
| α-helix | 170 | 1 | |
| β-strand | 191-193 | 3 | 4 |
| β-strand | 199-203 | 5 | 4 |
| β-strand | 204-209 | 6 | 49 |
| α-helix | 212-214 | 3 | |
| β-strand | 223-228 | 6 | 49 |
| β-strand | 241-253 | 13 | 49 |
| β-strand | 263-266 | 4 | 27 |
| α-helix | 280-287 | 8 | |
| β-strand | 290-291 | 2 | 27 |
| β-strand | 293-305 | 13 | 49 |
| α-helix | 323-328 | 6 | |
| α-helix | 331-342 | 12 | |
| α-helix | 346-354 | 9 | |
| α-helix | 362-373 | 12 | |
| β-strand | 378-379 | 2 | 50 |
| β-strand | 385-386 | 2 | 50 |
| β-strand | 392-396 | 5 | 51 |
| α-helix | 402-412 | 11 | |
| β-strand | 416-420 | 5 | 51 |
| α-helix | 421-423 | 3 | |
| β-strand | 424 | 1 | 33 |
| α-helix | 426-430 | 5 | |
| β-strand | 431-435 | 5 | 52 |
| β-strand | 442-446 | 5 | 52 |
| α-helix | 448-451 | 4 | |
| β-strand | 456-460 | 5 | 51 |
| α-helix | 462-464 | 3 | |
| α-helix | 467-479 | 13 | |
| β-strand | 481-486 | 6 | 53 |
| β-strand | 489-494 | 6 | 53 |
| β-strand | 498-503 | 6 | 51 |
| α-helix | 504-505 | 2 | |
| α-helix | 516-519 | 4 | |
| α-helix | 524-529 | 6 | |
| β-strand | 532-536 | 5 | 51 |
| α-helix | 542-557 | 16 | |
| α-helix | 569-579 | 11 | |
| β-strand | 585-586 | 2 | 54 |
| α-helix | 588-605 | 18 | |
| β-strand | 612 | 1 | 55 |
| α-helix | 618-634 | 17 | |
| β-strand | 639-640 | 2 | 54 |
| α-helix | 642-655 | 14 | |
| β-strand | 658 | 1 | 55 |
Chain 7: 26 helices, 23 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 6-19 | 14 | |
| α-helix | 32-42 | 11 | |
| β-strand | 47-51 | 5 | 56 |
| α-helix | 52-56 | 5 | |
| α-helix | 60-68 | 9 | |
| α-helix | 70-88 | 19 | |
| α-helix | 98-112 | 15 | |
| β-strand | 135-139 | 5 | 56 |
| α-helix | 140-141 | 2 | |
| α-helix | 145-146 | 2 | |
| β-strand | 147 | 1 | 30 |
| α-helix | 154-156 | 3 | |
| β-strand | 160-170 | 11 | 30 |
| β-strand | 174-183 | 10 | 30 |
| β-strand | 190-194 | 5 | 30 |
| β-strand | 199-200 | 2 | 29 |
| α-helix | 201-203 | 3 | |
| β-strand | 205 | 1 | 57 |
| α-helix | 209-214 | 6 | |
| β-strand | 219 | 1 | 57 |
| β-strand | 221-238 | 18 | 30 |
| α-helix | 248-250 | 3 | |
| β-strand | 252-258 | 7 | 30 |
| β-strand | 270-281 | 12 | 30 |
| β-strand | 293 | 1 | 13 |
| β-strand | 294-305 | 12 | 30 |
| α-helix | 307-309 | 3 | |
| α-helix | 332-337 | 6 | |
| α-helix | 348-359 | 12 | |
| β-strand | 377-381 | 5 | 58 |
| α-helix | 387-397 | 11 | |
| β-strand | 401-405 | 5 | 58 |
| α-helix | 406-408 | 3 | |
| β-strand | 417-418 | 2 | 59 |
| β-strand | 429-430 | 2 | 59 |
| α-helix | 433-436 | 4 | |
| β-strand | 440-445 | 6 | 58 |
| α-helix | 452-464 | 13 | |
| β-strand | 466-469 | 4 | 60 |
| β-strand | 476-479 | 4 | 60 |
| β-strand | 482-488 | 7 | 58 |
| α-helix | 510-514 | 5 | |
| β-strand | 517-521 | 5 | 58 |
| α-helix | 527-543 | 17 | |
| α-helix | 552-555 | 4 | |
| α-helix | 556-567 | 12 | |
| α-helix | 578-593 | 16 | |
| α-helix | 603-620 | 18 | |
| α-helix | 627-642 | 16 | |
Chain A: 24 helices, 26 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 182-187 | 6 | |
| α-helix | 189-204 | 16 | |
| α-helix | 214-225 | 12 | |
| β-strand | 229-233 | 5 | 61 |
| α-helix | 234-240 | 7 | |
| α-helix | 242-247 | 6 | |
| α-helix | 252-270 | 19 | |
| α-helix | 273-276 | 4 | |
| β-strand | 282-286 | 5 | 61 |
| β-strand | 291 | 1 | 62 |
| α-helix | 294-296 | 3 | |
| β-strand | 305-315 | 11 | 62 |
| β-strand | 319-329 | 11 | 62 |
| β-strand | 334-340 | 7 | 62 |
| β-strand | 361-379 | 19 | 62 |
| β-strand | 393-399 | 7 | 62 |
| α-helix | 400-402 | 3 | |
| β-strand | 411-419 | 9 | 62 |
| β-strand | 434 | 1 | 63 |
| β-strand | 438-445 | 8 | 62 |
| α-helix | 459-469 | 11 | |
| α-helix | 473-480 | 8 | |
| α-helix | 489-500 | 12 | |
| β-strand | 505 | 1 | 64 |
| β-strand | 513 | 1 | 64 |
| β-strand | 519-523 | 5 | 65 |
| α-helix | 529-539 | 11 | |
| β-strand | 543-547 | 5 | 65 |
| β-strand | 559-562 | 4 | 66 |
| β-strand | 569-572 | 4 | 66 |
| α-helix | 575-578 | 4 | |
| β-strand | 583-587 | 5 | 65 |
| α-helix | 589-591 | 3 | |
| α-helix | 594-605 | 12 | |
| β-strand | 608 | 1 | 67 |
| β-strand | 611 | 1 | 68 |
| β-strand | 618 | 1 | 68 |
| β-strand | 621 | 1 | 67 |
| β-strand | 625-630 | 6 | 65 |
| α-helix | 643-647 | 5 | |
| α-helix | 651-655 | 5 | |
| β-strand | 659-663 | 5 | 65 |
| α-helix | 669-685 | 17 | |
| α-helix | 717-730 | 14 | |
| β-strand | 734 | 1 | 69 |
| α-helix | 742-755 | 14 | |
| α-helix | 764-781 | 18 | |
| β-strand | 785 | 1 | 69 |
| α-helix | 788-805 | 18 | |
| α-helix | 808-817 | 10 | |
Chain B: 28 helices, 33 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 5-8 | 4 | 13 |
| α-helix | 10-24 | 15 | |
| α-helix | 31-41 | 11 | |
| β-strand | 46-50 | 5 | 70 |
| α-helix | 51-57 | 7 | |
| α-helix | 59-67 | 9 | |
| α-helix | 70-87 | 18 | |
| α-helix | 90-94 | 5 | |
| β-strand | 99-103 | 5 | 70 |
| β-strand | 110-111 | 2 | 71 |
| α-helix | 118-120 | 3 | |
| β-strand | 123-127 | 5 | 71 |
| β-strand | 130-134 | 5 | 71 |
| α-helix | 135-137 | 3 | |
| β-strand | 138-147 | 10 | 11 |
| β-strand | 154-158 | 5 | 11 |
| β-strand | 185-196 | 12 | 11 |
| β-strand | 197-202 | 6 | 71 |
| α-helix | 209 | 1 | |
| α-helix | 213-215 | 3 | |
| β-strand | 216-221 | 6 | 71 |
| α-helix | 226-228 | 3 | |
| β-strand | 236-243 | 8 | 71 |
| α-helix | 244-246 | 3 | |
| β-strand | 252 | 1 | 72 |
| β-strand | 255 | 1 | 73 |
| β-strand | 258-266 | 9 | 71 |
| α-helix | 278-290 | 13 | |
| α-helix | 295-303 | 9 | |
| α-helix | 311-322 | 12 | |
| β-strand | 327-328 | 2 | 74 |
| β-strand | 334-335 | 2 | 74 |
| β-strand | 341-345 | 5 | 75 |
| α-helix | 351-361 | 11 | |
| β-strand | 365-369 | 5 | 75 |
| α-helix | 375-377 | 3 | |
| β-strand | 381-384 | 4 | 76 |
| β-strand | 391-394 | 4 | 76 |
| α-helix | 397-400 | 4 | |
| β-strand | 405-409 | 5 | 75 |
| α-helix | 416-422 | 7 | |
| β-strand | 430-431 | 2 | 77 |
| β-strand | 434 | 1 | 78 |
| β-strand | 439 | 1 | 78 |
| β-strand | 442-443 | 2 | 77 |
| β-strand | 447-452 | 6 | 75 |
| α-helix | 453-454 | 2 | |
| α-helix | 465-468 | 4 | |
| α-helix | 473-478 | 6 | |
| β-strand | 481-485 | 5 | 75 |
| α-helix | 491-505 | 15 | |
| α-helix | 566-577 | 12 | |
| β-strand | 581-582 | 2 | 79 |
| α-helix | 584-597 | 14 | |
| α-helix | 600-602 | 3 | |
| β-strand | 604 | 1 | 80 |
| β-strand | 607-609 | 3 | 80 |
| α-helix | 615-632 | 18 | |
| β-strand | 636-637 | 2 | 79 |
| α-helix | 639-653 | 15 | |
| β-strand | 654-656 | 3 | 80 |
4 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| DNA replication licensing factor MCM2 | 2, A | protein | 904 | Homo sapiens | P49736 (AlphaFold model) |
| DNA replication licensing factor MCM3 | 3, B | protein | 808 | Homo sapiens | P25205 (AlphaFold model) |
| DNA replication licensing factor MCM4 | 4, C | protein | 863 | Homo sapiens | P33991 (AlphaFold model) |
| DNA replication licensing factor MCM5 | 5, D | protein | 737 | Homo sapiens | P33992 (AlphaFold model) |
| DNA replication licensing factor MCM6 | 6, E | protein | 821 | Homo sapiens | Q14566 |
| DNA replication licensing factor MCM7 | 7, F | protein | 722 | Homo sapiens | P33993 |
| DNA (44-mer) | O | DNA | 44 | Saccharomyces cerevisiae | |
| DNA (44-mer) | S | DNA | 44 | Saccharomyces cerevisiae | |
Sequence of entity 1 (2, A), FASTA
>9CAQ_1 DNA replication licensing factor MCM2 (chains 2, A)
MAESSESFTMASSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTE
GPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQR
DREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENLEDLKGH
SVREWVSMAGPRLEIHHRFKNFLRTHVDSHGHNVFKERISDMCKENRESLVVNYEDLAAR
EHVLAYFLPEAPAELLQIFDEAALEVVLAMYPKYDRITNHIHVRISHLPLVEELRSLRQL
HLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCNFVLGPFCQSQNQEVKPGSCPECQSAGP
FEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIYHN
NYDGSLNTANGFPVFATVILANHVAKKDNKVAVGELTDEDVKMITSLSKDQQIGEKIFAS
IAPSIYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLCGDPGTAKSQFLKYIEKVS
SRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGVCLIDEFDKMNDQDRTSI
HEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTFSENVDLTEPIISRFDIL
CVVRDTVDPVQDEMLARFVVGSHVRHHPSNKEEEGLANGSAAEPAMPNTYGVEPLPQEVL
KKYIIYAKERVHPKLNQMDQDKVAKMYSDLRKESMATGSIPITVRHIESMIRMAEAHARI
HLRDYVIEDDVNMAIRVMLESFIDTQKFSVMRSMRKTFARYLSFRRDNNELLLFILKQLV
AEQVTYQRNRFGAQQDTIEVPEKDLVDKARQINIHNLSAFYDSELFRMNKFSHDLKRKMI
LQQF
Sequence of entity 2 (3, B), FASTA
>9CAQ_2 DNA replication licensing factor MCM3 (chains 3, B)
MAGTVVLDDVELREAQRDYLDFLDDEEDQGIYQSKVRELISDNQYRLIVNVNDLRRKNEK
RANRLLNNAFEELVAFQRALKDFVASIDATYAKQYEEFYVGLEGSFGSKHVSPRTLTSCF
LSCVVCVEGIVTKCSLVRPKVVRSVHYCPATKKTIERRYSDLTTLVAFPSSSVYPTKDEE
NNPLETEYGLSVYKDHQTITIQEMPEKAPAGQLPRSVDVILDDDLVDKAKPGDRVQVVGT
YRCLPGKKGGYTSGTFRTVLIACNVKQMSKDAQPSFSAEDIAKIKKFSKTRSKDIFDQLA
KSLAPSIHGHDYVKKAILCLLLGGVERDLENGSHIRGDINILLIGDPSVAKSQLLRYVLC
TAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDMDRT
AIHEVMEQGRVTIAKAGIHARLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFD
LLFIMLDQMDPEQDREISDHVLRMHRYRAPGEQDGDAMPLGSAVDILATDDPNFSQEDQQ
DTQIYEKHDNLLHGTKKKKEKMVSAAFMKKYIHVAKIIKPVLTQESATYIAEEYSRLRSQ
DSMSSDTARTSPVTARTLETLIRLATAHAKARMSKTVDLQDAEEAVELVQYAYFKKVLEK
EKKRKKRSEDESETEDEEEKSQEDQEQKRKRRKTRQPDAKDGDSYDPYDFSDTEEEMPQV
HTPKTADSQETKESQKVELSESRLKAFKVALLDVFREAHAQSIGMNRLTESINRDSEEPF
SSVEIQAALSKMQDDNQVMVSEGIIFLI
Sequence of entity 3 (4, C), FASTA
>9CAQ_3 DNA replication licensing factor MCM4 (chains 4, C)
MSSPASTPSRRGSRRGRATPAQTPRSEDARSSPSQRRRGEDSTSTGELQPMPTSPGVDLQ
SPAAQDVLFSSPPQMHSSAIPLDFDVSSPLTYGTPSSRVEGTPRSGVRGTPVRQRPDLGS
AQKGLQVDLQSDGAAAEDIVASEQSLGQKLVIWGTDVNVAACKENFQRFLQRFIDPLAKE
EENVGIDITEPLYMQRLGEINVIGEPFLNVNCEHIKSFDKNLYRQLISYPQEVIPTFDMA
VNEIFFDRYPDSILEHQIQVRPFNALKTKNMRNLNPEDIDQLITISGMVIRTSQLIPEMQ
EAFFQCQVCAHTTRVEMDRGRIAEPSVCGRCHTTHSMALIHNRSLFSDKQMIKLQESPED
MPAGQTPHTVILFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIH
YRKTDAKRLHGLDEEAEQKLFSEKRVELLKELSRKPDIYERLASALAPSIYEHEDIKKGI
LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA
VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAK
AGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDR
RLAHHLVALYYQSEEQAEEELLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVDMRKI
GSSRGMVSAYPRQLESLIRLAEAHAKVRLSNKVEAIDVEEAKRLHREALKQSATDPRTGI
VDISILTTGMSATSRKRKEELAEALKKLILSKGKTPALKYQQLFEDIRGQSDIAITKDMF
EEALRALADDDFLTVTGKTVRLL
Sequence of entity 4 (5, D), FASTA
>9CAQ_4 DNA replication licensing factor MCM5 (chains 5, D)
SNAMSGFDDPGIFYSDSFGGDAQADEGQARKSQLQRRFKEFLRQYRVGTDRTGFTFKYRD
ELKRHYNLGEYWIEVEMEDLASFDEDLADYLYKQPAEHLQLLEEAAKEVADEVTRPRPSG
EEVLQDIQVMLKSDASPSSIRSLKSDMMSHLVKIPGIIIAASAVRAKATRISIQCRSCRN
TLTNIAMRPGLEGYALPRKCNTDQAGRPKCPLDPYFIMPDKCKCVDFQTLKLQELPDAVP
HGEMPRHMQLYCDRYLCDKVVPGNRVTIMGIYSIKKFGLTTSRGRDRVGVGIRSSYIRVL
GIQVDTDGSGRSFAGAVSPQEEEEFRRLAALPNVYEVISKSIAPSIFGGTDMKKAIACLL
FGGSRKRLPDGLTRRGDINLLMLGDPGTAKSQLLKFVEKCSPIGVYTSGKGSSAAGLTAS
VMRDPSSRNFIMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTT
LNSRCSVLAAANSVFGRWDETKGEDNIDFMPTILSRFDMIFIVKDEHNEERDVMLAKHVI
TLHVSALTQTQAVEGEIDLAKLKKFIAYCRVKCGPRLSAEAAEKLKNRYIIMRSGARQHE
RDSDRRSSIPITVRQLEAIVRIAEALSKMKLQPFATEADVEEALRLFQVSTLDAALSGTL
SGVEGFTSQEDQEMLSRIEKQLKRRFAIGSQVSEHSIIKDFTKQKYPEHAIHKVLQLMLR
RGEIQHRMQRKVLYRLK
Sequence of entity 5 (6, E), FASTA
>9CAQ_5 DNA replication licensing factor MCM6 (chains 6, E)
MDLAAAAEPGAGSQHLEVRDEVAEKCQKLFLDFLEEFQSSDGEIKYLQLAEELIRPERNT
LVVSFVDLEQFNQQLSTTIQEEFYRVYPYLCRALKTFVKDRKEIPLAKDFYVAFQDLPTR
HKIRELTSSRIGLLTRISGQVVRTHPVHPELVSGTFLCLDCQTVIRDVEQQFKYTQPNIC
RNPVCANRRRFLLDTNKSRFVDFQKVRIQETQAELPRGSIPRSLEVILRAEAVESAQAGD
KCDFTGTLIVVPDVSKLSTPGARAETNSRVSGVDGYETEGIRGLRALGVRDLSYRLVFLA
CCVAPTNPRFGGKELRDEEQTAESIKNQMTVKEWEKVFEMSQDKNLYHNLCTSLFPTIHG
NDEVKRGVLLMLFGGVPKTTGEGTSLRGDINVCIVGDPSTAKSQFLKHVEEFSPRAVYTS
GKASSAAGLTAAVVRDEESHEFVIEAGALMLADNGVCCIDEFDKMDVRDQVAIHEAMEQQ
TISITKAGVKATLNARTSILAAANPISGHYDRSKSLKQNINLSAPIMSRFDLFFILVDEC
NEVTDYAIARRIVDLHSRIEESIDRVYSLDDIRRYLLFARQFKPKISKESEDFIVEQYKH
LRQRDGSGVTKSSWRITVRQLESMIRLSEAMARMHCCDEVQPKHVKEAFRLLNKSIIRVE
TPDVNLDQEEEIQMEVDEGAGGINGHADSPAPVNGINGYNEDINQESAPKASLRLGFSEY
CRISNLIVLHLRKVEEEEDESALKRSELVNWYLKEIESEIDSEEELINKKRIIEKVIHRL
THYDHVLIELTQAGLKGSTEGSESYEEDPYLVVNPNYLLED
Sequence of entity 6 (7, F), FASTA
>9CAQ_6 DNA replication licensing factor MCM7 (chains 7, F)
SNAMALKDYALEKEKVKKFLQEFYQDDELGKKQFKYGNQLVRLAHREQVALYVDLDDVAE
DDPELVDSICENARRYAKLFADAVQELLPQYKEREVVNKDVLDVYIEHRLMMEQRSRDPG
MVRSPQNQYPAELMRRFELYFQGPSSNKPRVIREVRADSVGKLVTVRGIVTRVSEVKPKM
VVATYTCDQCGAETYQPIQSPTFMPLIMCPSQECQTNRSGGRLYLQTRGSRFIKFQEMKM
QEHSDQVPVGNIPRSITVLVEGENTRIAQPGDHVSVTGIFLPILRTGFRQVVQGLLSETY
LEAHRIVKMNKSEDDESGAGELTREELRQIAEEDFYEKLAASIAPEIYGHEDVKKALLLL
LVGGVDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAA
VLRDSVSGELTLEGGALVLADQGVCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTT
LNARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHI
TYVHQHSRQPPSQFEPLDMKLMRRYIAMCREKQPMVPESLADYITAAYVEMRREAWASKD
ATYTSARTLLAILRLSTALARLRMVDVVEKEDVNEAIRLMEMSKDSLLGDKGQTARTQRP
ADVIFATVRELVSGGRSVRFSEAEQRCVSRGFTPAQFQAALDEYEELNVWQVNASRTRIT
FV
Sequence of entity 7 (O), FASTA
>9CAQ_7 DNA (44-MER) (chains O)
AAAAAAAAAAAAAAAAAAAAAAATTTTTTTTTTTTTTTTTTTTT
Sequence of entity 8 (S), FASTA
>9CAQ_8 DNA (44-MER) (chains S)
AAAAAAAAAAAAAAAAAAAAATTTTTTTTTTTTTTTTTTTTTTT
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| MG | Magnesium ion | Mg | 9 |
| ZN | Zinc ion | Zn | 10 |
| ADP | Adenosine-5'-diphosphate | C10 H15 N5 O10 P2 | 8 |
| ATP | Adenosine-5'-triphosphate | C10 H16 N5 O13 P3 | 2 |
Primary citation
Multiple mechanisms for licensing human replication origins. Yang, R., Hunker, O., Wise, M. et al. Nature (2024) 636:488-498. DOI 10.1038/s41586-024-08237-8 · PubMed
Other PDB entries of the same protein (UniProt P49736 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 6YA7 1.67 Å, Cdc7-Dbf4 bound to an Mcm2-S40 derived bivalent substrate
- 7CIZ 1.8 Å, Crystal structure of DNAJC9 HBD helix2 in complex with H3.3-H4 dimer and MCM2 HBD
- 5BNX 2.31 Å, Crystal structure of Human MCM2 HBD and ASF1b chaperoning a histone H3.3-H4 dimer
- 5JA4 2.42 Å, Crystal structure of human TONSL and MCM2 HBDs binding to a histone H3-H4 tetramer
- 7CJ0 2.5 Å, Crystal structure of DNAJC9 HBD in complex with H3.3-H4 dimer and MCM2 HBD
- 7W1Y 2.59 Å, Human MCM double hexamer bound to natural DNA duplex (polyAT/polyTA)
- 9E2Z 2.6 Å, Cryo-EM structure of human CMG helicase stalled at G4-containing DNA template
- 5BNV 2.79 Å, Crystal structure of Human MCM2 HBD chaperoning a histone H3-H4 tetramer
- 7PLO 2.8 Å, H. sapiens replisome-CUL2/LRR1 complex
- 8W0F 2.8 Å, Cryo-EM structure of a human MCM2-7 double hexamer on dsDNA
- 4UUZ 2.9 Å, MCM2-histone complex
- 5BO0 2.91 Å, Crystal structure of Human MCM2 HBD and ASF1b chaperoning a histone H3.2-H4 dimer
Browse structure collections
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