Ribosome biogenesis protein RLP24 (RLP24) is a 199-residue protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c). This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: Q07915.
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The mean pLDDT of this model is 84.6 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 61% |
| 70 to 90 | Confident: backbone generally right | 19% |
| 50 to 70 | Low: treat with caution | 12% |
| Below 50 | Very low: often disordered regions | 8% |
What pLDDT means and how to read it
Involved in the biogenesis of the 60S ribosomal subunit (PubMed:12808088, PubMed:23185031). Ensures the docking of NOG1 to pre-60S ribosomal particles (PubMed:12808088). Activates and recruits ATPase AFG2 to cytoplasmic pre-60S ribosomal particles (PubMed:23185031)
Associated with nucleolar and cytoplasmic pre-60S particles (PubMed:12808088). At the end of biogenesis it dissociates from cytoplasmic pre-60S particles and is likely to be exchanged for its ribosomal homolog, RPL24 (PubMed:12808088, PubMed:23185031). Interacts (via C-terminus) with AFG2 (hexameric form); the interaction is direct, recruits AFG2 to pre-60S ribosomal particles and promotes AFG2…
Cytoplasm, Nucleus
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 7UOO | EM | 2.34 Å | u=1-199 |
| 7V08 | EM | 2.36 Å | u=1-199 |
| 7UQB | EM | 2.43 Å | u=1-199 |
| 7UQZ | EM | 2.44 Å | u=1-199 |
| 8V83 | EM | 2.53 Å | u=1-199 |
| 8HFR | EM | 2.64 Å | tB=1-199 |
| 8V87 | EM | 2.66 Å | u=1-199 |
| 8V84 | EM | 2.7 Å | u=1-199 |
| 7U0H | EM | 2.76 Å | u=1-199 |
| 7UG6 | EM | 2.9 Å | u=1-199 |
| 6YLG | EM | 3.0 Å | u=1-199 |
| 7NAC | EM | 3.04 Å | u=1-199 |
| 7NAD | EM | 3.04 Å | u=1-199 |
| 7R7A | EM | 3.04 Å | u=1-199 |
| 7R72 | EM | 3.07 Å | u=1-199 |
| 3JCT | EM | 3.08 Å | u=1-199 |
| 6YLH | EM | 3.1 Å | u=1-199 |
| 7OF1 | EM | 3.1 Å | u=1-199 |
| 7OHQ | EM | 3.1 Å | u=1-199 |
| 7BT6 | EM | 3.12 Å | u=1-199 |
Showing 20 of 45 experimental structures (best resolution first).
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