2BCW: 50S ribosomal protein L11

Coordinates of the N-terminal domain of ribosomal protein L11,C-terminal domain of ribosomal protein L7/L12 and a portion of the G' domain of elongation factor G, as fitted into cryo-em map of an Escherichia coli 70S*EF-G*GDP*fusidic acid complex. Determined by electron microscopy at 11.2 Å resolution. Released 20 Dec 2005.

Method

Electron microscopy

Resolution

11.2 Å

Organisms

Thermotoga maritima, Escherichia coli, Thermus thermophilus

Chains

3

Atoms

191

Mol. weight

20.67 kDa

Released

20 Dec 2005

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Molecules and chains

>2BCW_1 50S ribosomal protein L11 (chains A)
QIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFT
FIIKT

>2BCW_2 50S ribosomal protein L7/L12 (chains B)
EFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEE
AGAEVEVK

>2BCW_3 Elongation factor G (chains C)
PIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITP

Primary citation

Interaction of the G' Domain of Elongation Factor G and the C-Terminal Domain of Ribosomal Protein L7/L12 during Translocation as Revealed by Cryo-EM. Datta, P.P., Sharma, M.R., Qi, L. et al. Mol Cell (2005) 20:723-731. DOI 10.1016/j.molcel.2005.10.028 · PubMed

Related structures

Other PDB entries of the same protein (UniProt P29395 (AlphaFold model), which also has an AlphaFold model), best resolution first:

• 1MMS 2.57 Å, Crystal structure of the ribosomal PROTEIN L11-RNA complex
• 4V42 5.5 Å, Crystal structure of the ribosome at 5.5 A resolution.
• 4V4R 5.9 Å, Crystal structure of the whole ribosomal complex.
• 4V4T 6.46 Å, Crystal structure of the whole ribosomal complex with a stop codon in the A-site.
• 4V4S 6.76 Å, Crystal structure of the whole ribosomal complex.
• 487D 7.5 Å, Seven ribosomal proteins fitted to a CRYO-electron microscopic map of the large 50S…
• 1R2W 9.0 Å, Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of the 70S ribosome
• 1R2X 9.0 Å, Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of EF-Tu ternary…
• 1PN7 10.8 Å, Coordinates of S12, L11 proteins and P-tRNA, from the 70S X-ray structure aligned to the…
• 1PN8 10.8 Å, Coordinates of S12, L11 proteins and E-site tRNA from 70S crystal structure separately…
• 1EG0 11.5 Å, Fitting of components with known structure into an 11.5 a cryo-EM map of the e.coli 70S…
• 1MVR 12.8 Å, Decoding Center & Peptidyl transferase center from the X-ray structure of the Thermus…

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