Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with Lacto-N-fucopentaose III. Determined by X-ray diffraction at 1.33 Å resolution. Released 2 Feb 2011.
Explore 3AP9 in 3D Show helices and sheets RCSB PDB PDBe
3AP9 contains 2 α-helices and 13 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
| Element | Residues | Length | Sheet |
|---|---|---|---|
| β-strand | 9-13 | 5 | 1 |
| α-helix | 15-16 | 2 | |
| β-strand | 19-22 | 4 | 2 |
| β-strand | 32-38 | 7 | 1 |
| β-strand | 45-56 | 12 | 2 |
| β-strand | 59-69 | 11 | 2 |
| β-strand | 75-82 | 8 | 2 |
| β-strand | 85-86 | 2 | 2 |
| β-strand | 90-92 | 3 | 2 |
| β-strand | 102-109 | 8 | 1 |
| β-strand | 113-118 | 6 | 1 |
| β-strand | 121-127 | 7 | 1 |
| α-helix | 132-134 | 3 | |
| β-strand | 137-142 | 6 | 2 |
| β-strand | 145-152 | 8 | 1 |
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|---|---|---|---|---|
| Galectin-8 | A | protein | 154 | Homo sapiens | O00214 (AlphaFold model) |
>3AP9_1 Galectin-8 (chains A) MMLSLNNLQNIIYNPVIPFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSVKPRA DVAFHFNPRFKRAGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNG KHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFS
Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans. Ideo, H., Matsuzaka, T., Nonaka, T. et al. J Biol Chem (2011) 286:11346-11355. DOI 10.1074/jbc.M110.195925 · PubMed
Other PDB entries of the same protein (UniProt O00214 (AlphaFold model), which also has an AlphaFold model), best resolution first:
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