5VWC: Human Scribble PDZ1 domain

Crystal structure of human Scribble PDZ1 domain. Determined by X-ray diffraction at 1.91 Å resolution. Released 8 Nov 2017.

Method
X-ray diffraction
Resolution
1.91 Å
Organism
Homo sapiens
Chains
1
Atoms
769
Mol. weight
10.73 kDa
Released
8 Nov 2017

Explore 5VWC in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

5VWC contains 4 α-helices and 6 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 4 helices, 6 β-strands

ElementResiduesLengthSheet
β-strand726-73271
β-strand740-74451
α-helix749-7502
β-strand758-76361
α-helix768-7725
α-helix7781
β-strand779-78351
β-strand786-78721
α-helix793-8019
β-strand806-81271

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Protein scribble homologAprotein101Homo sapiensQ14160 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>5VWC_1 Protein scribble homolog (chains A)
GPLGSMEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGD
KLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRERETSV

Primary citation

Structural basis for the differential interaction of Scribble PDZ domains with the guanine nucleotide exchange factor beta-PIX. Lim, K.Y.B., Godde, N.J., Humbert, P.O. et al. J Biol Chem (2017) 292:20425-20436. DOI 10.1074/jbc.M117.799452 · PubMed

Other PDB entries of the same protein (UniProt Q14160 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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