5XER: TK9 NMR structure in DPC micelle

TK9 NMR structure in DPC micelle. Determined by solution NMR. Released 18 Apr 2018.

Method
Solution NMR
Organism
SARS coronavirus
Chains
1
Atoms
78
Mol. weight
1.12 kDa
Released
18 Apr 2018

Explore 5XER in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

5XER contains 1 α-helix and 0 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 1 helix, 0 β-strands

ElementResiduesLengthSheet
α-helix2-87

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Thr-val-tyr-val-tyr-ser-arg-val-lysAprotein9SARS coronavirusP59637 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>5XER_1 THR-VAL-TYR-VAL-TYR-SER-ARG-VAL-LYS (chains A)
TVYVYSRVK

Primary citation

Structural insights of a self-assembling 9-residue peptide from the C-terminal tail of the SARS corona virus E-protein in DPC and SDS micelles: A combined high and low resolution spectroscopic study. Ghosh, A., Bhattacharyya, D., Bhunia, A. Biochim Biophys Acta Biomembr (2018) 1860:335-346. DOI 10.1016/j.bbamem.2017.10.015 · PubMed

Other PDB entries of the same protein (UniProt P59637 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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