8A9Q: Albumin

Computational design of stable mammalian serum albumins for bacterial expression. Determined by X-ray diffraction at 2.0 Å resolution. Released 10 May 2023.

Method
X-ray diffraction
Resolution
2.0 Å
Organism
Escherichia coli
Chains
2
Atoms
9,165
Mol. weight
135.87 kDa
Ligands
DAO, RWF, MYR
Released
10 May 2023

Explore 8A9Q in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

8A9Q contains 80 α-helices and 0 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 39 helices, 0 β-strands

ElementResiduesLengthSheet
α-helix6-149
α-helix16-3015
α-helix36-5520
α-helix66-7510
α-helix80-845
α-helix85-928
α-helix97-1048
α-helix116-1194
α-helix120-12910
α-helix131-14515
α-helix151-16818
α-helix174-20128
α-helix202-2065
α-helix208-22215
α-helix228-24720
α-helix250-26617
α-helix268-2703
α-helix276-2805
α-helix283-29210
α-helix293-2997
α-helix302-3043
α-helix3061
α-helix307-3115
α-helix315-3217
α-helix323-33715
α-helix343-36119
α-helix366-3705
α-helix373-39725
α-helix400-41415
α-helix420-43819
α-helix442-46625
α-helix471-4777
α-helix484-4907
α-helix500-5023
α-helix504-5074
α-helix512-5154
α-helix518-53518
α-helix541-55818
α-helix564-58219
Chain B: 41 helices, 0 β-strands
ElementResiduesLengthSheet
α-helix6-149
α-helix16-3015
α-helix36-5520
α-helix66-7510
α-helix80-845
α-helix85-928
α-helix97-1048
α-helix113-1153
α-helix117-1193
α-helix120-12910
α-helix131-14515
α-helix151-16818
α-helix174-20128
α-helix202-2065
α-helix208-22215
α-helix228-24720
α-helix250-26617
α-helix268-2714
α-helix273-2753
α-helix278-2803
α-helix283-2853
α-helix286-2916
α-helix293-2986
α-helix302-3043
α-helix3061
α-helix307-3115
α-helix315-3206
α-helix323-33614
α-helix343-36119
α-helix366-3705
α-helix373-39725
α-helix400-41415
α-helix420-43718
α-helix442-46625
α-helix471-4788
α-helix484-4896
α-helix504-5074
α-helix511-5144
α-helix518-53518
α-helix541-55919
α-helix564-58219

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
AlbuminA, Bprotein585Escherichia coliP02768 (AlphaFold model)
Sequence of entity 1 (A, B), FASTA
>8A9Q_1 Albumin (chains A, B)
DAHKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDLVKMVNEVTEFAKTCVADESAE
NCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEP
DVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLYFAKRYKAAFTECCQAADKAACLLP
KLDELREEGKASSAKQRHKCAILQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTK
VHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPA
DLPSLAADFIESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKC
CAAADPHECYSKVFDEFKPLIEEPQNLIKQNCELFEQLGEYKFQNALLIRYTKKVPQVST
PTLVEVARNLGKVGSKCCKHPEAKRMPCAEDYLSIVLNQLCVLHEKTPVSDRVTKCCTES
LVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEEERQIKKQTALVELVKHKPKAT
KEQLKAVMDDFSAFVEKCCKADDKETCFAEEGKKLIAASQAALGL

Ligands and cofactors

IDNameFormulaCopies
DAOLauric acidC12 H24 O21
RWFR-warfarinC19 H16 O42
MYRMyristic acidC14 H28 O27

Primary citation

Stable Mammalian Serum Albumins Designed for Bacterial Expression. Khersonsky, O., Goldsmith, M., Zaretsky, I. et al. J Mol Biol (2023) 435:168191-168191. DOI 10.1016/j.jmb.2023.168191 · PubMed

Other PDB entries of the same protein (UniProt P02768 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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