9EWY: Human MICAL1

CryoEM structure of human MICAL1. Determined by electron microscopy at 3.1 Å resolution. Released 20 Nov 2024.

Method
Electron microscopy
Resolution
3.1 Å
Organism
Homo sapiens
Chains
1
Atoms
6,496
Mol. weight
118.93 kDa
Ligands
FAD, ZN
Released
20 Nov 2024

Explore 9EWY in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

9EWY contains 40 α-helices and 33 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 40 helices, 33 β-strands

ElementResiduesLengthSheet
α-helix9-1911
α-helix23-3614
α-helix45-5410
α-helix62-7110
β-strand86-9051
α-helix94-10512
β-strand109-11461
β-strand124-12632
α-helix129-1379
α-helix140-1434
β-strand154-15632
α-helix157-17115
β-strand174-17741
β-strand180-18563
β-strand19414
β-strand195-19953
α-helix201-2033
α-helix204-2074
β-strand21114
β-strand213-21641
β-strand229-23245
β-strand238-24586
α-helix250-2534
α-helix255-2573
β-strand259-26136
β-strand26516
α-helix267-27610
β-strand281-28886
β-strand291-29886
α-helix300-3067
β-strand30917
α-helix316-3194
β-strand32517
α-helix327-34115
β-strand35116
α-helix3521
β-strand35318
β-strand35918
β-strand361-36556
β-strand369-37245
β-strand376-38161
β-strand384-39071
α-helix392-3943
β-strand39615
α-helix397-3993
α-helix400-4023
α-helix405-42420
α-helix429-44012
α-helix443-4453
α-helix455-4573
α-helix462-4643
α-helix476-4827
β-strand483-48531
α-helix510-52213
α-helix541-55010
α-helix557-5615
α-helix567-5759
α-helix576-5805
α-helix588-5936
α-helix597-61014
α-helix631-64414
α-helix703-7042
β-strand709-71249
β-strand715-71849
β-strand723110
α-helix7291
β-strand730110
α-helix7311
β-strand736-739411
β-strand744-747411
α-helix909-95850
α-helix964-101451
α-helix1024-106037

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
[F-actin]-monooxygenase MICAL1Aprotein1067Homo sapiensQ8TDZ2 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>9EWY_1 [F-actin]-monooxygenase MICAL1 (chains A)
MASPTSTNPAHAHFESFLQAQLCQDVLSSFQELCGALGLEPGGGLPQYHKIKDQLNYWSA
KSLWTKLDKRAGQPVYQQGRACTSTKCLVVGAGPCGLRVAVELALLGARVVLVEKRTKFS
RHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVT
FTGLQPPPRKGSGWRAQLQPNPPAQLANYEFDVLISAAGGKFVPEGFKVREMRGKLAIGI
TANFVNGRTVEETQVPEISGVARIYNQSFFQSLLKATGIDLENIVYYKDDTHYFVMTAKK
QCLLRLGVLRQDWPDTNRLLGSANVVPEALQRFTRAAADFATHGKLGKLEFAQDAHGQPD
VSAFDFTSMMRAESSARVQEKHGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMV
KRWAEGAESLEVLAERESLYQLLSQTSPENMHRNVAQYGLDPATRYPNLNLRAVTPNQVR
DLYDVLAKEPVQRNNDKTDTGMPATGSAGTQEELLRWCQEQTAGYPGVHVSDLSSSWADG
LALCALVYRLQPGLLEPSELQGLGALEATAWALKVAENELGITPVVSAQAVVAGSDPLGL
IAYLSHFHSAFKSMAHSPGPVSQASPGTSSAVLFLSKLQRTLQRSRAKENAEDAGGKKLR
LEMEAETPSTEVPPDPEPGVPLTPPSQHQEAGAGDLCALCGEHLYVLERLCVNGHFFHRS
CFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQTDHKAEGSDRGPESPELPTPSENSMPP
GLSTPTASQEGAGPVPDPSQPTRRQIRLSSPERQRLSSLNLTPDPEMEPPPKPPRSCSAL
ARHALESSFVGWGLPVQSPQALVAMEKEEKESPFSSEEEEEDVPLDSDVEQALQTFAKTS
GTMNNYPTWRRTLLRRAKEEEMKRFCKAQTIQRRLNEIEAALRELEAEGVKLELALRRQS
SSPEQQKKLWVGQLLQLVDKKNSLVAEEAELMITVQELNLEEKQWQLDQELRGYMNREEN
LKTAADRQAEDQVLRKLVDLVNQRDALIRFQEERRLSELALGTGAQG

Ligands and cofactors

IDNameFormulaCopies
FADFlavin-adenine dinucleotideC27 H33 N9 O15 P21
ZNZinc ionZn2

Primary citation

Structural basis of MICAL autoinhibition. Horvath, M., Schrofel, A., Kowalska, K. et al. Nat Commun (2024) 15:9810-9810. DOI 10.1038/s41467-024-54131-2 · PubMed

Other PDB entries of the same protein (UniProt Q8TDZ2 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

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