4IJH: Replication protein A 70 kDa DNA-binding subunit

Fragment-based Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A. Determined by X-ray diffraction at 1.5 Å resolution. Released 14 Aug 2013.

Method
X-ray diffraction
Resolution
1.5 Å
Organism
Homo sapiens
Chains
1
Atoms
1,266
Mol. weight
15.53 kDa
Ligands
1EJ
Released
14 Aug 2013

Explore 4IJH in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

4IJH contains 6 α-helices and 6 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 6 helices, 6 β-strands

ElementResiduesLengthSheet
α-helix1-44
α-helix9-113
α-helix12-165
β-strand24-3291
β-strand42-4761
β-strand51-5881
α-helix60-623
α-helix63-686
β-strand76-86111
β-strand92-103121
α-helix105-1084
β-strand116-11721

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Replication protein A 70 kDa DNA-binding subunitAprotein123Homo sapiensP27694 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>4IJH_1 Replication protein A 70 kDa DNA-binding subunit (chains A)
GSHMVGQLSRGAIAAIMQKGDTNIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFM
LATQLNPLVEEEQLSSNCVCQIHRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVP
YNE

Ligands and cofactors

IDNameFormulaCopies
1EJ3-chloro-6-[3-(4-fluorophenyl)-5-sulfanyl-4H-1,2,4-triazol-4-yl]-1-benzothiophe…C17 H9 Cl F N3 O2 S25

Primary citation

Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A. Patrone, J.D., Kennedy, J.P., Frank, A.O. et al. ACS Med Chem Lett (2013) 4:601-605. DOI 10.1021/ml400032y · PubMed

Other PDB entries of the same protein (UniProt P27694 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

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