5G05: Combined apo phosphorylated APC
Cryo-EM structure of combined apo phosphorylated APC. Determined by electron microscopy at 3.4 Å resolution. Released 25 May 2016.
- Method
- Electron microscopy
- Resolution
- 3.4 Å
- Organisms
- HOMO SAPIENS, BOS TAURUS, UNIDENTIFIED
- Chains
- 20
- Atoms
- 63,181
- Mol. weight
- 1173.8 kDa
- Ligands
- ZN
- Released
- 25 May 2016
Explore 5G05 in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
5G05 contains 432 α-helices and 123 β-strands across 19 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain A: 72 helices, 54 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 13 | 1 | 1 |
| β-strand | 17-20 | 4 | 2 |
| α-helix | 23-30 | 8 | |
| β-strand | 73-78 | 6 | 3 |
| β-strand | 81 | 1 | 4 |
| β-strand | 84 | 1 | 4 |
| β-strand | 90-95 | 6 | 3 |
| β-strand | 99-103 | 5 | 3 |
| β-strand | 113-118 | 6 | 3 |
| β-strand | 128-131 | 4 | 5 |
| β-strand | 148-154 | 7 | 5 |
| β-strand | 158-163 | 6 | 5 |
| β-strand | 168-172 | 5 | 5 |
| β-strand | 180-183 | 4 | 6 |
| β-strand | 186-189 | 4 | 6 |
| β-strand | 211-213 | 3 | 6 |
| α-helix | 219-220 | 2 | |
| β-strand | 221-222 | 2 | 6 |
| β-strand | 224-225 | 2 | 7 |
| β-strand | 237-238 | 2 | 7 |
| β-strand | 245-250 | 6 | 8 |
| β-strand | 255-259 | 5 | 8 |
| β-strand | 266-270 | 5 | 8 |
| β-strand | 408-409 | 2 | 7 |
| β-strand | 410-413 | 4 | 8 |
| β-strand | 429-434 | 6 | 9 |
| β-strand | 440-446 | 7 | 9 |
| β-strand | 451-457 | 7 | 9 |
| β-strand | 468-474 | 7 | 9 |
| β-strand | 478-482 | 5 | 10 |
| β-strand | 487-491 | 5 | 10 |
| β-strand | 497-500 | 4 | 10 |
| β-strand | 505-507 | 3 | 10 |
| β-strand | 510 | 1 | 1 |
| β-strand | 584-591 | 8 | 2 |
| β-strand | 594-599 | 6 | 2 |
| β-strand | 604-608 | 5 | 2 |
| α-helix | 609-611 | 3 | |
| α-helix | 616-628 | 13 | |
| α-helix | 631-646 | 16 | |
| α-helix | 656-667 | 12 | |
| α-helix | 674-676 | 3 | |
| α-helix | 705-712 | 8 | |
| α-helix | 714-721 | 8 | |
| β-strand | 750 | 1 | 11 |
| α-helix | 759-776 | 18 | |
| α-helix | 782-794 | 13 | |
| α-helix | 801-809 | 9 | |
| α-helix | 811-814 | 4 | |
| β-strand | 821 | 1 | 11 |
| α-helix | 844-853 | 10 | |
| α-helix | 868-880 | 13 | |
| α-helix | 927-936 | 10 | |
| α-helix | 941-944 | 4 | |
| α-helix | 949-964 | 16 | |
| α-helix | 972-977 | 6 | |
| α-helix | 981-991 | 11 | |
| α-helix | 1021-1027 | 7 | |
| α-helix | 1033-1041 | 9 | |
| α-helix | 1046 | 1 | |
| β-strand | 1047-1048 | 2 | 12 |
| α-helix | 1059-1087 | 29 | |
| β-strand | 1092 | 1 | 13 |
| α-helix | 1099-1100 | 2 | |
| α-helix | 1102-1104 | 3 | |
| β-strand | 1108-1111 | 4 | 12 |
| β-strand | 1116-1119 | 4 | 12 |
| α-helix | 1133-1145 | 13 | |
| β-strand | 1147 | 1 | 13 |
| α-helix | 1148-1149 | 2 | |
| α-helix | 1150-1153 | 4 | |
| α-helix | 1169-1182 | 14 | |
| α-helix | 1184-1187 | 4 | |
| α-helix | 1195-1199 | 5 | |
| α-helix | 1202-1216 | 15 | |
| α-helix | 1222-1231 | 10 | |
| α-helix | 1247-1260 | 14 | |
| α-helix | 1267-1277 | 11 | |
| α-helix | 1291-1306 | 16 | |
| α-helix | 1321-1330 | 10 | |
| β-strand | 1353 | 1 | 14 |
| α-helix | 1360-1374 | 15 | |
| α-helix | 1381-1386 | 6 | |
| α-helix | 1393-1398 | 6 | |
| α-helix | 1401-1414 | 14 | |
| α-helix | 1423-1429 | 7 | |
| α-helix | 1432-1436 | 5 | |
| α-helix | 1457-1475 | 19 | |
| α-helix | 1482-1500 | 19 | |
| α-helix | 1504-1507 | 4 | |
| α-helix | 1509-1526 | 18 | |
| α-helix | 1533-1545 | 13 | |
| α-helix | 1552-1565 | 14 | |
| α-helix | 1567-1570 | 4 | |
| β-strand | 1572-1574 | 3 | 15 |
| α-helix | 1579-1587 | 9 | |
| α-helix | 1604-1609 | 6 | |
| α-helix | 1610-1613 | 4 | |
| β-strand | 1614-1616 | 3 | 15 |
| β-strand | 1618 | 1 | 16 |
| β-strand | 1620-1622 | 3 | 17 |
| β-strand | 1629 | 1 | 17 |
| β-strand | 1633-1639 | 7 | 18 |
| β-strand | 1646-1652 | 7 | 18 |
| β-strand | 1656 | 1 | 16 |
| α-helix | 1657 | 1 | |
| α-helix | 1659 | 1 | |
| β-strand | 1663-1668 | 6 | 18 |
| β-strand | 1675-1678 | 4 | 18 |
| α-helix | 1685-1692 | 8 | |
| β-strand | 1696-1698 | 3 | 17 |
| α-helix | 1700-1702 | 3 | |
| α-helix | 1738-1741 | 4 | |
| α-helix | 1745-1750 | 6 | |
| α-helix | 1751-1755 | 5 | |
| α-helix | 1765-1780 | 16 | |
| α-helix | 1786-1802 | 17 | |
| α-helix | 1809-1820 | 12 | |
| α-helix | 1825-1827 | 3 | |
| α-helix | 1845-1862 | 18 | |
| α-helix | 1865-1872 | 8 | |
| α-helix | 1877-1878 | 2 | |
| α-helix | 1881-1892 | 12 | |
| α-helix | 1894-1896 | 3 | |
| α-helix | 1912-1920 | 9 | |
| α-helix | 1925-1934 | 10 | |
Chain B: 2 helices, 10 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 3-9 | 7 | 19 |
| β-strand | 13 | 1 | 20 |
| β-strand | 22 | 1 | 21 |
| β-strand | 29 | 1 | 21 |
| β-strand | 46-48 | 3 | 22 |
| β-strand | 49 | 1 | 23 |
| β-strand | 54-56 | 3 | 22 |
| α-helix | 57-67 | 11 | |
| β-strand | 72 | 1 | 24 |
| β-strand | 79 | 1 | 24 |
| α-helix | 80 | 1 | |
| β-strand | 82 | 1 | 23 |
Chain C: 32 helices, 0 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 29-46 | 18 | |
| α-helix | 49-61 | 13 | |
| α-helix | 63-65 | 3 | |
| α-helix | 72-76 | 5 | |
| α-helix | 78-96 | 19 | |
| α-helix | 99-105 | 7 | |
| α-helix | 112-136 | 25 | |
| α-helix | 151-164 | 14 | |
| α-helix | 170-181 | 12 | |
| α-helix | 185-198 | 14 | |
| α-helix | 203-212 | 10 | |
| α-helix | 216-221 | 6 | |
| α-helix | 229-241 | 13 | |
| α-helix | 244-256 | 13 | |
| α-helix | 259-261 | 3 | |
| α-helix | 263-275 | 13 | |
| α-helix | 279-292 | 14 | |
| α-helix | 300-309 | 10 | |
| α-helix | 313-326 | 14 | |
| α-helix | 331-343 | 13 | |
| α-helix | 347-360 | 14 | |
| α-helix | 365-378 | 14 | |
| α-helix | 381-394 | 14 | |
| α-helix | 399-412 | 14 | |
| α-helix | 415-428 | 14 | |
| α-helix | 433-446 | 14 | |
| α-helix | 449-462 | 14 | |
| α-helix | 468-479 | 12 | |
| α-helix | 483-499 | 17 | |
| α-helix | 510-523 | 14 | |
| α-helix | 526-538 | 13 | |
| α-helix | 542-556 | 15 | |
Chain D: 3 helices, 0 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 9-11 | 3 | |
| α-helix | 27-45 | 19 | |
| α-helix | 52-53 | 2 | |
Chain E: 4 helices, 0 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 53-91 | 39 | |
| α-helix | 92-94 | 3 | |
| α-helix | 97-98 | 2 | |
| α-helix | 99-103 | 5 | |
Chain F: 30 helices, 0 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 6-17 | 12 | |
| α-helix | 21-34 | 14 | |
| α-helix | 38-50 | 13 | |
| α-helix | 54-62 | 9 | |
| α-helix | 69-81 | 13 | |
| α-helix | 85-92 | 8 | |
| α-helix | 103-110 | 8 | |
| α-helix | 111-113 | 3 | |
| α-helix | 114-127 | 14 | |
| α-helix | 131-144 | 14 | |
| α-helix | 150-158 | 9 | |
| α-helix | 164-167 | 4 | |
| α-helix | 456-477 | 22 | |
| α-helix | 481-490 | 10 | |
| α-helix | 493-496 | 4 | |
| α-helix | 499-511 | 13 | |
| α-helix | 515-528 | 14 | |
| α-helix | 536-545 | 10 | |
| α-helix | 549-560 | 12 | |
| α-helix | 567-579 | 13 | |
| α-helix | 583-596 | 14 | |
| α-helix | 601-613 | 13 | |
| α-helix | 619-630 | 12 | |
| α-helix | 635-648 | 14 | |
| α-helix | 651-664 | 14 | |
| α-helix | 668-681 | 14 | |
| α-helix | 692-698 | 7 | |
| α-helix | 703-715 | 13 | |
| α-helix | 719-732 | 14 | |
| α-helix | 737-750 | 14 | |
Chains G and W: 2 helices, 0 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 4-7 | 4 | |
| α-helix | 13-22 | 10 | |
Chain H: 31 helices, 0 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 7-17 | 11 | |
| α-helix | 21-35 | 15 | |
| α-helix | 38-50 | 13 | |
| α-helix | 54-63 | 10 | |
| α-helix | 69-81 | 13 | |
| α-helix | 85-93 | 9 | |
| α-helix | 102-110 | 9 | |
| α-helix | 111-113 | 3 | |
| α-helix | 114-128 | 15 | |
| α-helix | 131-144 | 14 | |
| α-helix | 149-157 | 9 | |
| α-helix | 165-173 | 9 | |
| α-helix | 452-478 | 27 | |
| α-helix | 481-489 | 9 | |
| α-helix | 494-497 | 4 | |
| α-helix | 499-512 | 14 | |
| α-helix | 515-528 | 14 | |
| α-helix | 536-546 | 11 | |
| α-helix | 549-562 | 14 | |
| α-helix | 567-579 | 13 | |
| α-helix | 583-596 | 14 | |
| α-helix | 601-614 | 14 | |
| α-helix | 617-630 | 14 | |
| α-helix | 635-648 | 14 | |
| α-helix | 651-664 | 14 | |
| α-helix | 669-681 | 13 | |
| α-helix | 685-698 | 14 | |
| α-helix | 703-716 | 14 | |
| α-helix | 719-732 | 14 | |
| α-helix | 737-750 | 14 | |
| α-helix | 753-766 | 14 | |
10 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| Anaphase-promoting complex subunit 1 | A | protein | 1944 | HOMO SAPIENS | Q9H1A4 (AlphaFold model) |
| Anaphase-promoting complex subunit 11 | B | protein | 84 | HOMO SAPIENS | Q9NYG5 (AlphaFold model) |
| Cell division cycle protein 23 homolog | C, P | protein | 597 | HOMO SAPIENS | Q9UJX2 (AlphaFold model) |
| Anaphase-promoting complex subunit 15 | D | protein | 121 | HOMO SAPIENS | P60006 (AlphaFold model) |
| Anaphase-promoting complex subunit 16 | E | protein | 110 | HOMO SAPIENS | Q96DE5 |
| Cell division cycle protein 27 homolog | F, H | protein | 824 | HOMO SAPIENS | P30260 |
| Anaphase-promoting complex subunit CDC26 | G, W | protein | 85 | HOMO SAPIENS | Q8NHZ8 |
| Anaphase-promoting complex subunit 4 | I | protein | 808 | HOMO SAPIENS | Q9UJX5 |
| Cell division cycle protein 16 homolog | J, K | protein | 620 | HOMO SAPIENS | Q13042 |
| Anaphase-promoting complex subunit 10 | L | protein | 185 | HOMO SAPIENS | Q9UM13 |
| Anaphase-promoting complex subunit 13 | M | protein | 74 | BOS TAURUS | Q9BS18 |
| Anaphase-promoting complex subunit 2 | N | protein | 822 | HOMO SAPIENS | Q9UJX6 |
3 more molecules are not listed.
Sequence of entity 1 (A), FASTA
>5G05_1 ANAPHASE-PROMOTING COMPLEX SUBUNIT 1 (chains A)
MSNFYEERTTMIAARDLQEFVPFGRDHCKHHPNALNLQLRQLQPASELWSSDGAAGLVGS
LQEVTIHEKQKESWQLRKGVSEIGEDVDYDEELYVAGNMVIWSKGSKSQALAVYKAFTVD
SPVQQALWCDFIISQDKSEKAYSSNEVEKCICILQSSCINMHSIEGKDYIASLPFQVANV
WPTKYGLLFERSASSHEVPPGSPREPLPTMFSMLHPLDEITPLVCKSGSLFGSSRVQYVV
DHAMKIVFLNTDPSIVMTYDAVQNVHSVWTLRRVKSEEENVVLKFSEQGGTPQNVATSSS
LTAHLRSLSKGDSPVTSPFQNYSSIHSQSRSTSSPSLHSRSPSISNMAALSRAHSPALGV
HSFSGVQRFNISSHNQSPKRHSISHSPNSNSNGSFLAPETEPIVPELCIDHLWTETITNI
REKNSQASKVFITSDLCGQKFLCFLVESQLQLRCVKFQESNDKTQLIFGSVTNIPAKDAA
PVEKIDTMLVLEGSGNLVLYTGVVRVGKVFIPGLPAPSLTMSNTMPRPSTPLDGVSTPKP
LSKLLGSLDEVVLLSPVPELRDSSKLHDSLYNEDCTFQQLGTYIHSIRDPVHNRVTLELS
NGSMVRITIPEIATSELVQTCLQAIKFILPKEIAVQMLVKWYNVHSAPGGPSYHSEWNLF
VTCLMNMMGYNTDRLAWTRNFDFEGSLSPVIAPKKARPSETGSDDDWEYLLNSDYHQNVE
SHLLNRSLCLSPSEASQMKDEDFSQNLSLDSSTLLFTHIPAIFFVLHLVYEELKLNTLMG
EGICSLVELLVQLARDLKLGPYVDHYYRDYPTLVRTTGQVCTIDPGQTGFMHHPSFFTSE
PPSIYQWVSSCLKGEGMPPYPYLPGICERSRLVVLSIALYILGDESLVSDESSQYLTRIT
IAPQKLQVEQEENRFSFRHSTSVSSLAERLVVWMTNVGFTLRDLETLPFGIALPIRDAIY
HCREQPASDWPEAVCLLIGRQDLSKQACEGNLPKGKSVLSSDVPSGTETEEEDDGMNDMN
HEVMSLIWSEDLRVQDVRRLLQSAHPVRVNVVQYPELSDHEFIEEKENRLLQLCQRTMAL
PVGRGMFTLFSYHPVPTEPLPIPKLNLTGRAPPRNTTVDLNSGNIDVPPNMTSWASFHNG
VAAGLKIAPASQIDSAWIVYNKPKHAELANEYAGFLMALGLNGHLTKLATLNIHDYLTKG
HEMTSIGLLLGVSAAKLGTMDMSITRLLSIHIPALLPPTSTELDVPHNVQVAAVVGIGLV
YQGTAHRHTAEVLLAEIGRPPGPEMEYCTDRESYSLAAGLALGMVCLGHGSNLIGMSDLN
VPEQLYQYMVGGHRRFQTGMHREKHKSPSYQIKEGDTINVDVTCPGATLALAMIYLKTNN
RSIADWLRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSIS
LSEIELPCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFNCLHKFAKDFMTYLS
APNASVTGPHNLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTGGEMNYGFHLAHHM
ALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLLV
PVDVDTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLIDL
SKGTQHLKSILSKDGVLYVKLRAGQLSYKEDPMGWQSLLAQTVANRNSEARAFKPETISA
FTSDPALLSFAEYFCKPTVNMGQKQEILDLFSSVLYECVTQETPEMLPAYIAMDQAIRRL
GRREMSETSELWQIKLVLEFFSSRSHQERLQNHPKRGLFMNSEFLPVVKCTIDNTLDQWL
QVGGDMCVHAYLSGQPLEESQLSMLACFLVYHSVPAPQHLPPIGLEGSTSFAELLFKFKQ
LKMPVRALLRLAPLLLGNPQPMVM
Sequence of entity 2 (B), FASTA
>5G05_2 ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 (chains B)
MKVKIKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPGDDCPLVWGQCSHCFHMHCI
LKWLHAQQVQQHCPMCRQEWKFKE
Sequence of entity 3 (C, P), FASTA
>5G05_3 CELL DIVISION CYCLE PROTEIN 23 HOMOLOG (chains C, P)
MAASTSMVPVAVTAAVAPVLSINSDFSDLREIKKQLLLIAGLTRERGLLHSSKWSAELAF
SLPALPLAELQPPPPITEEDAQDMDAYTLAKAYFDVKEYDRAAHFLHGCNSKKAYFLYMY
SRYLSGEKKKDDETVDSLGPLEKGQVKNEALRELRVELSKKHQARELDGFGLYLYGVVLR
KLDLVKEAIDVFVEATHVLPLHWGAWLELCNLITDKEMLKFLSLPDTWMKEFFLAHIYTE
LQLIEEALQKYQNLIDVGFSKSSYIVSQIAVAYHNIRDIDKALSIFNELRKQDPYRIENM
DTFSNLLYVRSMKSELSYLAHNLCEIDKYRVETCCVIGNYYSLRSQHEKAALYFQRALKL
NPRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLY
YYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVEKMALVKLAKLHEQL
TESEQAAQCYIKYIQDIYSCGEIVEHLEESTAFRYLAQYYFKCKLWDEASTCAQKCCAFN
DTREEGKALLRQILQLRNQGETPTTEVPAPFFLPASLSANNTPTRRVSPLNLSSVTP
Sequence of entity 4 (D), FASTA
>5G05_4 ANAPHASE-PROMOTING COMPLEX SUBUNIT 15 (chains D)
MSTLFPSLFPRVTETLWFNLDRPCVEETELQQQEQQHQAWLQSIAEKDNNLVPIGKPASE
HYDDEEEEDDEDDEDSEEDSEDDEDMQDMDEMNDYNESPDDGEVNEVDMEGNEQDQDQWM
I
Sequence of entity 5 (E), FASTA
>5G05_5 ANAPHASE-PROMOTING COMPLEX SUBUNIT 16 (chains E)
MAASSSSSSAGGVSGSSVTGSGFSVSDLAPPRKALFTYPKGAGEMLEDGSERFLCESVFS
YQVASTLKQVKHDQQVARMEKLAGLVEELEADEWRFKPIEQLLGFTPSSG
Sequence of entity 6 (F, H), FASTA
>5G05_6 CELL DIVISION CYCLE PROTEIN 27 HOMOLOG (chains F, H)
MTVLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRL
LKGHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFGDSACFTLSL
LGHVYCKTDRLAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKFTSLQNFSNCL
PNSCTTQVPNHSLSHRQPETVLTETPQDTIELNRLNLESSNSKYSLNTDSSVSYIDSAVI
SPDTVPLGTGTSILSKQVQNKPKTGRSLLGGPAALSPLTPSFGILPLETPSPGDGSYLQN
YTNTPPVIDVPSTGAPSKKSVARIGQTGTKSVFSQSGNSREVTPILAQTQSSGPQTSTTP
QVLSPTITSPPNALPRRSSRLFTSDSSTTKENSKKLKMKFPPKIPNRKTKSKTNKGGITQ
PNINDSLEITKLDSSIISEGKISTITPQIQAFNLQKAAAEGLMSLLREMGKGYLALCSYN
CKEAINILSHLPSHHYNTGWVLCQIGRAYFELSEYMQAERIFSEVRRIENYRVEGMEIYS
TTLWHLQKDVALSVLSKDLTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDPNY
AYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQEKFSLAEMHFQK
ALDINPQSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNPLCKFHRASVLFANEKYK
SALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWAMDLDPKGANNQIKEAID
KRYLPDDEEPITQEEQIMGTDESQESSMTDADDTQLHAAESDEF
Sequence of entity 7 (G, W), FASTA
>5G05_7 ANAPHASE-PROMOTING COMPLEX SUBUNIT CDC26 (chains G, W)
MLRRKPTRLELKLDDIEEFENIRKDLETRKKQKEDVEVVGGSDGEGAIGLSSDPKSREQM
INDRIGYKPQPKPNNRSSQFGSLEF
Sequence of entity 8 (I), FASTA
>5G05_8 ANAPHASE-PROMOTING COMPLEX SUBUNIT 4 (chains I)
MLRFPTCFPSFRVVGEKQLPQEIIFLVWSPKRDLIALANTAGEVLLHRLASFHRVWSFPP
NENTGKEVTCLAWRPDGKLLAFALADTKKIVLCDVEKPESLHSFSVEAPVSCMHWMEVTV
ESSVLTSFYNAEDESNLLLPKLPTLPKNYSNTSKIFSEENSDEIIKLLGDVRLNILVLGG
SSGFIELYAYGMFKIARVTGIAGTCLALCLSSDLKSLSVVTEVSTNGASEVSYFQLETNL
LYSFLPEVTRMARKFTHISALLQYINLSLTCMCEAWEEILMQMDSRLTKFVQEKNTTTSV
QDEFMHLLLWGKASAELQTLLMNQLTVKGLKKLGQSIESSYSSIQKLVISHLQSGSESLL
YHLSELKGMASWKQKYEPLGLDAAGIEEAITAVGSFILKANELLQVIDSSMKNFKAFFRW
LYVAMLRMTEDHVLPELNKMTQKDITFVAEFLTEHFNEAPDLYNRKGKYFNVERVGQYLK
DEDDDLVSPPNTEGNQWYDFLQNSSHLKESPLLFPYYPRKSLHFVKRRMENIIDQCLQKP
ADVIGKSMNQAICIPLYRDTRSEDSTRRLFKFPFLWNNKTSNLHYLLFTILEDSLYKMCI
LRRHTDISQSVSNGLIAIKFGSFTYATTEKVRRSIYSCLDAQFYDDETVTVVLKDTVGRE
GRDRLLVQLPLSLVYNSEDSAEYQFTGTYSTRLDEQCSAIPTRTMHFEKHWRLLESMKAQ
YVAGNGFRKVSCVLSSNLRHVRVFEMDIDDEWELDESSDEEEEASNKPVKIKEEVLSESE
AENQQAGAAALAPEIVIKVEKLDPELDS
Sequence of entity 9 (J, K), FASTA
>5G05_9 CELL DIVISION CYCLE PROTEIN 16 HOMOLOG (chains J, K)
MNLERLRKRVRQYLDQQQYQSALFWADKVASLSREEPQDIYWLAQCLYLTAQYHRAAHAL
RSRKLDKLYEACRYLAARCHYAAKEHQQALDVLDMEEPINKRLFEKYLKDESGFKDPSSD
WEMSQSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQE
EKELLESLPLSKLCNEEQELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAER
HYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPV
SWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTA
AQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKT
AEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAS
TYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKD
KLKCYDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSRPSLEETF
EIEMNESDMMLETSMSDHST
Sequence of entity 10 (L), FASTA
>5G05_10 ANAPHASE-PROMOTING COMPLEX SUBUNIT 10 (chains L)
MTTPNKTPPGADPKQLERTGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQ
PHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWI
HVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMM
YRSIR
Sequence of entity 11 (M), FASTA
>5G05_11 ANAPHASE-PROMOTING COMPLEX SUBUNIT 13 (chains M)
MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPEPEQDNGGTTESVKEQEMKWTDL
ALQYLHENVPPIGN
Sequence of entity 12 (N), FASTA
>5G05_12 ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 (chains N)
MAAAVVVAEGDSDSRPGQELLVAWNTVSTGLVPPAALGLVSSRTSGAVPPKEEELRAAVE
VLRGHGLHSVLEEWFVEVLQNDLQANISPEFWNAISQCENSADEPQCLLLLLDAFGLLES
RLDPYLRSLELLEKWTRLGLLMGTGAQGLREEVHTMLRGVLFFSTPRTFQEMIQRLYGCF
LRVYMQSKRKGEGGTDPELEGELDSRYARRRYYRLLQSPLCAGCSSDKQQCWCRQALEQF
HQLSQVLHRLSLLERVSAEAVTTTLHQVTRERMEDRCRGEYERSFLREFHKWIERVVGWL
GKVFLQDGPARPASPEAGNTLRRWRCHVQRFFYRIYASLRIEELFSIVRDFPDSRPAIED
LKYCLERTDQRQQLLVSLKAALETRLLHPGVNTCDIITLYISAIKALRVLDPSMVILEVA
CEPIRRYLRTREDTVRQIVAGLTGDSDGTGDLAVELSKTDPASLETGQDSEDDSGEPEDW
VPDPVDADPGKSSSKRRSSDIISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIR
NVELLKLRFGEAPMHFCEVMLKDMADSRRINANIREEDEKRPAEEQPPFGVYAVILSSEF
WPPFKDEKLEVPEDIRAALEAYCKKYEQLKAMRTLSWKHTLGLVTMDVELADRTLSVAVT
PVQAVILLYFQDQASWTLEELSKAVKMPVALLRRRMSVWLQQGVLREEPPGTFSVIEEER
PQDRDNMVLIDSDDESDSGMASQADQKEEELLLFWTYIQAMLTNLESLSLDRIYNMLRMF
VVTGPALAEIDLQELQGYLQKKVRDQQLVYSAGVYRLPKNCS
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| ZN | Zinc ion | Zn | 3 |
Primary citation
Molecular Mechanism of Apc/C Activation by Mitotic Phosphorylation. Zhang, S., Chang, L., Alfieri, C. et al. Nature (2016) 533:260. DOI 10.1038/NATURE17973 · PubMed
Other PDB entries of the same protein (UniProt Q9H1A4 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 5LGG 2.15 Å, The N-terminal WD40 domain of Apc1 (Anaphase promoting complex subunit 1)
- 9GAW 2.9 Å, High-resolution structure of the Anaphase-promoting complex/cyclosome (APC/C) bound to…
- 6Q6G 3.2 Å, Cryo-EM structure of the APC/C-Cdc20-Cdk2-cyclinA2-Cks2 complex, the D1 box class
- 6Q6H 3.2 Å, Cryo-EM structure of the APC/C-Cdc20-Cdk2-cyclinA2-Cks2 complex, the D2 box class
- 8PKP 3.2 Å, Cryo-EM structure of the apo Anaphase-promoting complex/cyclosome (APC/C) at 3.2…
- 8TAU 3.5 Å, APC/C-CDH1-UBE2C-UBE2S-Ubiquitin-CyclinB
- 4UI9 3.6 Å, Atomic structure of the human Anaphase-Promoting Complex
- 6TNT 3.78 Å, SUMOylated apoAPC/C with repositioned APC2 WHB domain
- 6TLJ 3.8 Å, Cryo-EM structure of the Anaphase-promoting complex/Cyclosome, in complex with the…
- 5G04 3.9 Å, Structure of the human APC-Cdc20-Hsl1 complex
- 6TM5 3.9 Å, Cryo-EM structure of the Anaphase-promoting complex/Cyclosome, in complex with the Nek2A…
- 9N9R 3.9 Å, Model of APC/C-CDC20-UBE2C from H2A/H2B-bound complex
Browse structure collections
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