5LZ1: Human ACBD3 GOLD domain

Crystal structure of human ACBD3 GOLD domain. Determined by X-ray diffraction at 2.0 Å resolution. Released 14 Dec 2016.

Method
X-ray diffraction
Resolution
2.0 Å
Organism
Homo sapiens
Chains
1
Atoms
1,172
Mol. weight
19.39 kDa
Released
14 Dec 2016

Explore 5LZ1 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

5LZ1 contains 5 α-helices and 10 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 5 helices, 10 β-strands

ElementResiduesLengthSheet
α-helix365-3684
α-helix370-3723
β-strand373-37751
α-helix380-3878
α-helix391-3933
β-strand394-39741
β-strand402-40872
α-helix409-4102
β-strand415-42171
β-strand427-43482
β-strand444-44742
β-strand476-485102
β-strand491-49771
β-strand503-50972
β-strand518-527101

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Golgi resident protein GCP60Aprotein168Homo sapiensQ9H3P7 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>5LZ1_1 Golgi resident protein GCP60 (chains A)
GAMESLPVIAAPSMWTRPQIKDFKEKIQQDADSVITVGRGEVVTVRVPTHEEGSYLFWEF
ATDNYDIGFGVYFEWTDSPNTAVSVHVSESSDDDEEEEENIGCEEKAKKNANKPLLDEIV
PVYRRDCHEEVYAGSHQYPGRGVYLLKFDNSYSLWRSKSVYYRVYYTR

Primary citation

Kobuviral Non-structural 3A Proteins Act as Molecular Harnesses to Hijack the Host ACBD3 Protein. Klima, M., Chalupska, D., Rozycki, B. et al. Structure (2017) 25:219-230. DOI 10.1016/j.str.2016.11.021 · PubMed

Other PDB entries of the same protein (UniProt Q9H3P7 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

About this viewer

MolViewer shows 5LZ1 directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.