9HHL: Dynein-Dynactin-NuMA-LIS1
Structure of Dynein-Dynactin-NuMA-LIS1. Determined by electron microscopy at 6.53 Å resolution. Released 3 Dec 2025.
- Method
- Electron microscopy
- Resolution
- 6.53 Å
- Organisms
- Homo sapiens, Sus scrofa
- Chains
- 41
- Atoms
- 64,583
- Mol. weight
- 3953.07 kDa
- Ligands
- ZN, ATP, ADP
- Released
- 3 Dec 2025
Explore 9HHL in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
9HHL contains 568 α-helices and 530 β-strands across 41 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain 1: 3 helices, 1 β-strand
| Element | Residues | Length | Sheet |
|---|
| α-helix | 212-263 | 52 | |
| α-helix | 277-394 | 118 | |
| β-strand | 407-408 | 2 | 17 |
| α-helix | 409-424 | 16 | |
Chain 2: 3 helices, 0 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 212-264 | 53 | |
| α-helix | 277-394 | 118 | |
| α-helix | 409-424 | 16 | |
Chain A: 20 helices, 22 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 10-11 | 2 | |
| β-strand | 12-16 | 5 | 28 |
| β-strand | 20-25 | 6 | 28 |
| β-strand | 35-36 | 2 | 28 |
| β-strand | 39-42 | 4 | 29 |
| β-strand | 45-46 | 2 | 30 |
| β-strand | 57 | 1 | 29 |
| α-helix | 60-64 | 5 | |
| β-strand | 69-72 | 4 | 29 |
| β-strand | 75-76 | 2 | 31 |
| β-strand | 79-80 | 2 | 31 |
| α-helix | 83-92 | 10 | |
| β-strand | 108-112 | 5 | 28 |
| α-helix | 118-126 | 9 | |
| α-helix | 127-131 | 5 | |
| β-strand | 136-141 | 6 | 28 |
| α-helix | 142-149 | 8 | |
| β-strand | 155-160 | 6 | 32 |
| β-strand | 165-171 | 7 | 32 |
| β-strand | 174-175 | 2 | 32 |
| β-strand | 181-183 | 3 | 32 |
| α-helix | 187-201 | 15 | |
| α-helix | 208-220 | 13 | |
| β-strand | 223 | 1 | 33 |
| α-helix | 228-233 | 6 | |
| β-strand | 240-242 | 3 | 34 |
| β-strand | 248-250 | 3 | 34 |
| α-helix | 254-257 | 4 | |
| α-helix | 259-261 | 3 | |
| α-helix | 265-267 | 3 | |
| α-helix | 275-283 | 9 | |
| α-helix | 288-296 | 9 | |
| β-strand | 298-301 | 4 | 32 |
| α-helix | 304-306 | 3 | |
| β-strand | 308 | 1 | 33 |
| α-helix | 310-319 | 10 | |
| β-strand | 330-331 | 2 | 32 |
| α-helix | 339-348 | 10 | |
| α-helix | 352-354 | 3 | |
| β-strand | 358-359 | 2 | 28 |
| α-helix | 360-365 | 6 | |
| α-helix | 368-374 | 7 | |
Chain B: 22 helices, 22 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 12-16 | 5 | 39 |
| β-strand | 20-25 | 6 | 39 |
| β-strand | 33-36 | 4 | 39 |
| β-strand | 39-42 | 4 | 40 |
| β-strand | 45-46 | 2 | 41 |
| β-strand | 57 | 1 | 40 |
| α-helix | 60-64 | 5 | |
| α-helix | 66-68 | 3 | |
| β-strand | 69-72 | 4 | 40 |
| β-strand | 75-76 | 2 | 42 |
| β-strand | 79-80 | 2 | 42 |
| α-helix | 83-93 | 11 | |
| α-helix | 103-105 | 3 | |
| β-strand | 108-112 | 5 | 39 |
| α-helix | 118-126 | 9 | |
| α-helix | 127-131 | 5 | |
| β-strand | 136-141 | 6 | 39 |
| α-helix | 142-150 | 9 | |
| β-strand | 155-160 | 6 | 43 |
| β-strand | 165-171 | 7 | 43 |
| β-strand | 174-175 | 2 | 43 |
| β-strand | 181-183 | 3 | 43 |
| α-helix | 187-201 | 15 | |
| α-helix | 208-220 | 13 | |
| β-strand | 223 | 1 | 44 |
| α-helix | 228-233 | 6 | |
| α-helix | 235-236 | 2 | |
| β-strand | 240-242 | 3 | 45 |
| β-strand | 248-250 | 3 | 45 |
| α-helix | 254-257 | 4 | |
| α-helix | 258-262 | 5 | |
| α-helix | 265-268 | 4 | |
| α-helix | 275-284 | 10 | |
| α-helix | 288-295 | 8 | |
| β-strand | 298-301 | 4 | 43 |
| α-helix | 303-306 | 4 | |
| β-strand | 308 | 1 | 44 |
| α-helix | 311-321 | 11 | |
| β-strand | 328-331 | 4 | 43 |
| α-helix | 339-349 | 11 | |
| α-helix | 353-356 | 4 | |
| β-strand | 358-359 | 2 | 39 |
| α-helix | 360-366 | 7 | |
| α-helix | 368-374 | 7 | |
Chain C: 22 helices, 22 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 10-11 | 2 | |
| β-strand | 12-16 | 5 | 113 |
| β-strand | 20-25 | 6 | 113 |
| β-strand | 33-36 | 4 | 113 |
| β-strand | 39-42 | 4 | 114 |
| β-strand | 45-46 | 2 | 69 |
| β-strand | 57-58 | 2 | 114 |
| α-helix | 60-64 | 5 | |
| β-strand | 69-72 | 4 | 114 |
| β-strand | 75-76 | 2 | 115 |
| β-strand | 79-80 | 2 | 115 |
| α-helix | 83-93 | 11 | |
| β-strand | 108-111 | 4 | 113 |
| α-helix | 112-113 | 2 | |
| α-helix | 119-126 | 8 | |
| α-helix | 127-131 | 5 | |
| β-strand | 136-140 | 5 | 113 |
| α-helix | 142-150 | 9 | |
| β-strand | 155-160 | 6 | 30 |
| β-strand | 165-171 | 7 | 30 |
| β-strand | 174-175 | 2 | 30 |
| β-strand | 181-183 | 3 | 30 |
| α-helix | 187-201 | 15 | |
| α-helix | 208-220 | 13 | |
| β-strand | 223 | 1 | 116 |
| α-helix | 228-232 | 5 | |
| β-strand | 240-242 | 3 | 117 |
| β-strand | 248-250 | 3 | 117 |
| α-helix | 254-257 | 4 | |
| α-helix | 258-260 | 3 | |
| α-helix | 265-267 | 3 | |
| α-helix | 275-284 | 10 | |
| α-helix | 291-296 | 6 | |
| β-strand | 298-301 | 4 | 30 |
| α-helix | 303-305 | 3 | |
| β-strand | 308 | 1 | 116 |
| α-helix | 310-321 | 12 | |
| α-helix | 323 | 1 | |
| β-strand | 330-333 | 4 | 30 |
| α-helix | 339-348 | 10 | |
| α-helix | 353-356 | 4 | |
| β-strand | 358-359 | 2 | 113 |
| α-helix | 360-366 | 7 | |
| α-helix | 369-372 | 4 | |
Chain D: 19 helices, 23 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 12-15 | 4 | 49 |
| β-strand | 20-25 | 6 | 49 |
| β-strand | 33-36 | 4 | 49 |
| β-strand | 39-42 | 4 | 50 |
| β-strand | 45-46 | 2 | 51 |
| β-strand | 57 | 1 | 50 |
| α-helix | 60-64 | 5 | |
| β-strand | 69-72 | 4 | 50 |
| β-strand | 75-76 | 2 | 52 |
| β-strand | 79-80 | 2 | 52 |
| α-helix | 83-93 | 11 | |
| β-strand | 108-111 | 4 | 49 |
| α-helix | 118-126 | 9 | |
| α-helix | 127-131 | 5 | |
| β-strand | 136-140 | 5 | 49 |
| α-helix | 142-150 | 9 | |
| β-strand | 156-160 | 5 | 53 |
| β-strand | 165-168 | 4 | 53 |
| β-strand | 170-171 | 2 | 41 |
| β-strand | 174-175 | 2 | 41 |
| β-strand | 181-183 | 3 | 53 |
| α-helix | 187-201 | 15 | |
| α-helix | 208-221 | 14 | |
| β-strand | 223 | 1 | 54 |
| β-strand | 240-242 | 3 | 55 |
| β-strand | 248-250 | 3 | 55 |
| α-helix | 254-257 | 4 | |
| α-helix | 259-261 | 3 | |
| α-helix | 265-267 | 3 | |
| α-helix | 275-285 | 11 | |
| α-helix | 291-296 | 6 | |
| β-strand | 297-301 | 5 | 53 |
| α-helix | 303-306 | 4 | |
| β-strand | 308 | 1 | 54 |
| α-helix | 310-321 | 12 | |
| α-helix | 323 | 1 | |
| β-strand | 329-331 | 3 | 53 |
| α-helix | 339-348 | 10 | |
| α-helix | 353-356 | 4 | |
| β-strand | 358-359 | 2 | 49 |
| α-helix | 360-366 | 7 | |
| α-helix | 368-375 | 8 | |
Chain e: 39 helices, 10 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 22-23 | 2 | |
| β-strand | 24 | 1 | 135 |
| α-helix | 25-26 | 2 | |
| α-helix | 27-37 | 11 | |
| α-helix | 39-42 | 4 | |
| α-helix | 50-56 | 7 | |
| α-helix | 59-70 | 12 | |
| β-strand | 76-86 | 11 | 136 |
| α-helix | 93-95 | 3 | |
| β-strand | 96-104 | 9 | 136 |
| β-strand | 113-120 | 8 | 136 |
| β-strand | 126 | 1 | 135 |
| β-strand | 135-140 | 6 | 136 |
| α-helix | 145-152 | 8 | |
| α-helix | 153-157 | 5 | |
| α-helix | 158-168 | 11 | |
| α-helix | 179-198 | 20 | |
| α-helix | 201-204 | 4 | |
| α-helix | 211-222 | 12 | |
| α-helix | 229-232 | 4 | |
| α-helix | 235-237 | 3 | |
| α-helix | 239-260 | 22 | |
| α-helix | 271-292 | 22 | |
| α-helix | 295-306 | 12 | |
| α-helix | 310-314 | 5 | |
| α-helix | 315-319 | 5 | |
| α-helix | 322-336 | 15 | |
| α-helix | 341-345 | 5 | |
| α-helix | 350-364 | 15 | |
| α-helix | 374-399 | 26 | |
| α-helix | 406-440 | 35 | |
| α-helix | 457-483 | 27 | |
| α-helix | 514-529 | 16 | |
| α-helix | 540-572 | 33 | |
| α-helix | 578-587 | 10 | |
| α-helix | 597-624 | 28 | |
| α-helix | 631-638 | 8 | |
| α-helix | 643-669 | 27 | |
| α-helix | 673-675 | 3 | |
| α-helix | 677-691 | 15 | |
| α-helix | 696-709 | 14 | |
| β-strand | 718 | 1 | 137 |
| β-strand | 721-723 | 3 | 138 |
| β-strand | 732-734 | 3 | 138 |
| β-strand | 737 | 1 | 137 |
| α-helix | 741-756 | 16 | |
| α-helix | 762-797 | 36 | |
| α-helix | 806-820 | 15 | |
| α-helix | 829-848 | 20 | |
Chain E: 23 helices, 23 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 10-11 | 2 | |
| β-strand | 12-15 | 4 | 64 |
| β-strand | 20-25 | 6 | 64 |
| β-strand | 33-36 | 4 | 64 |
| β-strand | 39-42 | 4 | 65 |
| α-helix | 45 | 1 | |
| β-strand | 46 | 1 | 66 |
| β-strand | 57 | 1 | 65 |
| α-helix | 60-64 | 5 | |
| β-strand | 69-72 | 4 | 65 |
| β-strand | 75-76 | 2 | 67 |
| β-strand | 79-80 | 2 | 67 |
| α-helix | 83-93 | 11 | |
| β-strand | 108-111 | 4 | 64 |
| α-helix | 118-126 | 9 | |
| α-helix | 127-131 | 5 | |
| β-strand | 136-140 | 5 | 64 |
| α-helix | 142-150 | 9 | |
| β-strand | 155-160 | 6 | 68 |
| β-strand | 165-170 | 6 | 68 |
| β-strand | 171 | 1 | 69 |
| β-strand | 174-175 | 2 | 69 |
| β-strand | 181-183 | 3 | 68 |
| α-helix | 187-201 | 15 | |
| α-helix | 208-220 | 13 | |
| β-strand | 223 | 1 | 70 |
| α-helix | 228-233 | 6 | |
| α-helix | 235-237 | 3 | |
| β-strand | 240-242 | 3 | 71 |
| β-strand | 248-250 | 3 | 71 |
| α-helix | 254-257 | 4 | |
| α-helix | 258-261 | 4 | |
| α-helix | 265-268 | 4 | |
| α-helix | 275-285 | 11 | |
| α-helix | 291-296 | 6 | |
| β-strand | 298-301 | 4 | 68 |
| α-helix | 303-305 | 3 | |
| β-strand | 308 | 1 | 70 |
| α-helix | 310-321 | 12 | |
| α-helix | 323 | 1 | |
| β-strand | 329-331 | 3 | 68 |
| α-helix | 339-349 | 11 | |
| α-helix | 353-356 | 4 | |
| β-strand | 358-359 | 2 | 64 |
| α-helix | 360-366 | 7 | |
| α-helix | 368-374 | 7 | |
33 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| Cytoplasmic dynein 1 intermediate chain 2 | g, h, o, p | protein | 612 | Homo sapiens | Q13409 (AlphaFold model) |
| Nuclear mitotic apparatus protein 1,Methylated-DNA--protein-cysteine methyltransferase | 1, 2 | protein | 889 | Homo sapiens | P16455 (AlphaFold model), Q14980 (AlphaFold model) |
| ARP1 actin related protein 1 homolog A | A, B, C, D, E, F, G, I | protein | 376 | Sus scrofa | F2Z5G5 (AlphaFold model) |
| Actin, cytoplasmic 1 | H | protein | 375 | Sus scrofa | Q6QAQ1 |
| Arp11 | J | protein | 417 | Sus scrofa | I3LHK5 |
| Capping protein (Actin filament) muscle Z-line, alpha 1 | K | protein | 286 | Sus scrofa | A0PFK5 |
| F-actin-capping protein subunit beta | L | protein | 272 | Sus scrofa | A0PFK7 |
| Dynactin subunit 2 | M, N, P, Q, V | protein | 405 | Sus scrofa | A0A5G2QD80 |
| Dynactin subunit 3 | O, R | protein | 186 | Sus scrofa | F1SEC0 |
| Dynactin 6 | U | protein | 190 | Sus scrofa | D0G6S1 |
| Dynactin subunit 5 | W | protein | 182 | Sus scrofa | A0A286ZK88 |
| Dynactin subunit 4 | Y | protein | 467 | Sus scrofa | A0A4X1TB62 |
4 more molecules are not listed.
Sequence of entity 1 (g, h, o, p), FASTA
>9HHL_1 Cytoplasmic dynein 1 intermediate chain 2 (chains g, h, o, p)
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
EALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGAVGSRRGPIKLGMAKITQV
DFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIEPEEEKTLKKDEENDSKAPPH
ELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLS
LNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPE
YVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYC
VNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNN
FVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTV
KLWSTKNNKPLYSFEDNAGYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASIS
VEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRA
DAEEEAATRIPA
Sequence of entity 2 (1, 2), FASTA
>9HHL_2 Nuclear mitotic apparatus protein 1,Methylated-DNA--protein-cysteine methyltransferase (chains 1, 2)
MTLHATRGAALLSWVNSLHVADPVEAVLQLQDCSIFIKIIDRIHGTEEGQQILKQPVSER
LDFVCSFLQKNRKHPSSPECLVSAQKVLEGSELELAKMTMLLLYHSTMSSKSPRDWEQFE
YKIQAELAVILKFVLDHEDGLNLNEDLENFLQKAPVPSTCSSTFPEELSPPSHQAKREIR
FLELQKVASSSSGNNFLSGSPASPMGDILQTPQFQMRRLKKQLADERSNRDELELELAEN
RKLLTEKDAQIAMMQQRIDRLALLNEKQAASPLEPKELEELRDKNESLTMRLHETLKQCQ
DLKTEKSQMDRKINQLSEENGDLSFKLREFASHLQQLQDALNELTEEHSKATQEWLEKQA
QLEKELSAALQDKKCLEEKNEILQGKLSQLEEHLSQLQDNPPQEKGEVLGDVLQLETLKQ
EAATLAANNTQLQARVEMLETERGQQEAKLLAERGHFEEEKQQLSSLITDLQSSISNLSQ
AKEELEQASQAHGARLTAQVASLTSELTTLNATIQQQDQELAGLKQQAKEKQAQLAQTLQ
QQEQASQGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATAAEEREASLRERD
AALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEELQACVE
TARQEQHEAQAQVAELELQLRSEQQKATEKERVAQEKDQLQEQLQGSMDKDCEMKRTTLD
SPLGKLELSGCEQGLHRIIFLGKGTSAADAVEVPAPAAVLGGPEPLMQATAWLNAYFHQP
EAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYSHLAALAGNPAATAAVKTA
LSGNPVPILIPCHRVVQGDLDVGGYEGGLAVKEWLLAHEGHRLGKPGLG
Sequence of entity 3 (A, B, C, D, E, F, G, I), FASTA
>9HHL_3 ARP1 actin related protein 1 homolog A (chains A, B, C, D, E, F, G, I)
MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL
SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK
KEYEEDGARSIHRKTF
Sequence of entity 4 (H), FASTA
>9HHL_4 Actin, cytoplasmic 1 (chains H)
MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
Sequence of entity 5 (J), FASTA
>9HHL_5 Arp11 (chains J)
MPLYEGLGSGGEKTAVVIDLGEAFTKCGFAGETGPRCIIPSVIKKAGMPKPIKVVQYNIN
TEELYSYLKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLL
APSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLL
EQCTVDTGAAKEQSLPSVMGSIPEGVLEDIKVRTCFVSDLTRGLKIQAAKFNIDGNTERP
SPPPNVDYPLDGEKILHVLGSIRDSVVEILFEQDNEEKSVATLILDSLMQCPIDTRKQLA
ENLVIIGGTSMLPGFLHRLLAEIRYLVEKPKYKKTLGTKTFRIHTPPAKANCVAWLGGAI
FGALQDILGSRSVSKEYYNQTGRIPDWCSLNNPPLEMVFDVGKSQPPLMKRAFSTEK
Sequence of entity 6 (K), FASTA
>9HHL_6 Capping protein (Actin filament) muscle Z-line, alpha 1 (chains K)
MADFEDRVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMD
QFTPVKIEGYEDQVLITEHGDLGNSRFLDPRNKISFKFDHLRKEASDPQPEEVDGSLKSW
RESCDSALRAYVKDHYSNGFCTVYAKNIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFT
ITPPTAQVVGVLKIQVHYYEDGNVQLVSHKDVQDSVTVSNEAQTAKEFIKIIEHAENEYQ
TAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEMQNA
Sequence of entity 7 (L), FASTA
>9HHL_7 F-actin-capping protein subunit beta (chains L)
MSDQQLDCALDLMRRLPPQQIEKNLSDLIDLVPSLCEDLLSSVDQPLKIARDKVVGKDYL
LCDYNRDGDSYRSPWSNKYDPPLEDGAMPSARLRKLEVEANNAFDQYRDLYFEGGVSSVY
LWDLDHGFAGVILIKKAGDGSKKIKGCWDSIHVVEVQEKSSGRTAHYKLTSTVMLWLQTN
KSGSGTMNLGGSLTRQMEKDETVSDCSPHIANIGRLVEDMENKIRSTLNEIYFGKTKDIV
NGLRSVQTFADKSKQEALKNDLVEALKRKQQC
Sequence of entity 8 (M, N, P, Q, V), FASTA
>9HHL_8 Dynactin subunit 2 (chains M, N, P, Q, V)
MADPKYADLPGIARNEPDVYETSDLPEDDQAEFDAELEELTSTSVEHIIVNPNAAYDKFK
DKRVGTKGLDFSDRIGKTKRTGYESGEYEMLGEGLGVKETPQQKYQRLLHEVQELTTEVE
KIKMTVKESATEEKLTPVVLAKQLAALKQQLVASHLEKLLGPDAAINLTDPDGALAKRLL
LQLEATKNTKGAGSGGKTTSGSPPDSSLVTYELHSRPEQDKFSQAAKVAELEKRLTELEA
TVRCDQDAQNPLSAGLQGACLMETVELLQAKVSALDLAVLDQVEARLQSVLGKVNEIAKH
KASVEDADTQSKVHQLYETIQRWSPIASTLPELVQRLVTIKQLHEQAMQFGQLLTHLDTT
QQMIACSLKDNATLLTQVQTTMRENLSTVEGNFANIDERMKKLGK
Sequence of entity 9 (O, R), FASTA
>9HHL_9 Dynactin subunit 3 (chains O, R)
MAGVTDVQRLQARLEELERWVYGPGGSRGSRKVADGLVKVQVALGNIASKRERVKILYKK
IEDLIKYLDPEYMDRIAIPDASKLQFILAEEQFILSQVALLEQVEALVPMLDSAHIKAVP
EHAARLQRLAQIHIQQQDQCVEITEESKALLEEYNKTTMLLSKQFVQWDELLCQLEAAKQ
VKPAEE
Sequence of entity 10 (U), FASTA
>9HHL_10 Dynactin 6 (chains U)
MAEKTQKSVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQA
LIINAHPDNITPDAEDSEPKPMIIGTNNVFEVGCYSQAMKMGDNNVIESKAYVGRNVILT
SGCIIGACCNLNTFEVIPENTVIYGADCLRRVQTERPQPQTLQLDFLMKILPNYHHLKKT
MKGSSTPVKN
Sequence of entity 11 (W), FASTA
>9HHL_11 Dynactin subunit 5 (chains W)
MELGELLYNKSEYIETASGNKVSRQSVLCGSQNIVLNGKTIVMNDCIIRGDLANVRVGRH
CVVKSRSVIRPPFKKFSKGVAFFPLHIGDHVFIEEDCVVNAAQIGSYVHVGKNCVIGRRC
VLKDCCKILDNTVLPPETVVPPFTVFSGCPGLFSGELPECTQELMIDVTKSYYQKFLPLT
QV
Sequence of entity 12 (Y), FASTA
>9HHL_12 Dynactin subunit 4 (chains Y)
MASLLQSERVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPS
AEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLPDDPAKTAVKKAYYLACGFCRWTSRD
VGMADKSVASGGWQEPDHPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSQ
HTIHVVDKYGLGTRLQRPRAGTTITALAGLSLKEGEDQKEIKIEPAQAVDEVEPLPEDYY
TRPVNLTEVTTLQQRLLQPDFQPICASQLYPRHKHLLIKRSLRCRQCEHNLSKPEFNPTS
IKFKIQLVAVNYIPEVRIMSIPNLRYMKESQVLLTLTNPVENLTHVTLLECEEGDPDDTN
STAKVSVPPTELVLAGKDAAAEYDELAEPQDFPDDPDVVAFRKANKVGVFIKVTPQREEG
DVTVCFKLKHDFKNLAAPIRPVEEADPGAEVSWLTQHVELSLGPLLP
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| ZN | Zinc ion | Zn | 3 |
| ATP | Adenosine-5'-triphosphate | C10 H16 N5 O13 P3 | 2 |
| ADP | Adenosine-5'-diphosphate | C10 H15 N5 O10 P2 | 8 |
Primary citation
Activation and regulation of the dynein-dynactin-NuMA complex. Aslan, M., d'Amico, E.A., Cho, N.H. et al. Nat Chem Biol (2026) 22:1434-1445. DOI 10.1038/s41589-026-02156-7 · PubMed
Other PDB entries of the same protein (UniProt Q13409 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 7Z8I 3.3 Å, The barbed end complex of dynactin bound to BICDR1 and the cytoplasmic dynein tails (A2,…
- 6F1U 3.4 Å, N terminal region of dynein tail domains in complex with dynactin filament and BICDR-1
- 6F1Z 3.4 Å, Roadblock-1 region of the dynein tail/dynactin/BICDR1 complex
- 6F1T 3.5 Å, Cryo-EM structure of two dynein tail domains bound to dynactin and BICDR1
- 9BLY 3.5 Å, Composite structure of full-length human dynein-1 in phi-particle conformation
- 8PR2 3.8 Å, Cytoplasmic dynein-1 heavy chain bound to JIP3-LZI
- 8PR3 3.9 Å, Cytoplasmic dynein-1 heavy chain bound to JIP3-RH1
- 7Z8J 3.93 Å, Cytoplasmic dynein (A2) bound to BICDR1
- 9YNC 3.93 Å, Motor domains of phi-like human dynein-1 bound to dynactin-p150glued and LIS1
- 9YNG 4.07 Å, Dynactin and dynein-1 tail region of dynein-dynactin complex on microtubule in the…
- 8PQW 4.2 Å, Cytoplasmic dynein-1 motor domain bound to dynactin-p150glued and LIS1
- 9YND 4.26 Å, Motor domain of human dynein-1 in pre-power stroke bound to dynactin-p150glued-CC1B and…
Browse structure collections
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