Green to red photoconvertible GFP-like protein EosFP is a 226-residue protein from Lobophyllia hemprichii. This is its AlphaFold structure prediction, created 1 Jun 2022. UniProt accession: Q5S6Z9.
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The mean pLDDT of this model is 96.3 (very high overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 95% |
| 70 to 90 | Confident: backbone generally right | 2% |
| 50 to 70 | Low: treat with caution | 2% |
| Below 50 | Very low: often disordered regions | 2% |
What pLDDT means and how to read it
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 7QLJ | X-ray | 1.02 Å | A=1-222 |
| 7QLI | X-ray | 1.16 Å | A=1-222 |
| 7QLM | X-ray | 1.3 Å | A=1-222 |
| 7QLO | X-ray | 1.31 Å | A=1-222 |
| 7QLL | X-ray | 1.32 Å | A=1-222 |
| 9J0Q | X-ray | 1.34 Å | A=1-226 |
| 7QLK | X-ray | 1.46 Å | A=1-222 |
| 6GP0 | X-ray | 1.5 Å | A=1-226 |
| 6GP1 | X-ray | 1.5 Å | A=1-61, B=65-226 |
| 7QLN | X-ray | 1.5 Å | A=1-222 |
| 5OQ9 | X-ray | 1.51 Å | A=1-226 |
| 5OQA | X-ray | 1.53 Å | A=1-226 |
| 6YLS | X-ray | 1.55 Å | A=2-226 |
| 6GOY | X-ray | 1.65 Å | A=1-226 |
| 9J0R | X-ray | 1.66 Å | A/B=1-226 |
| 8UL2 | X-ray | 1.7 Å | 1/2=1-222 |
| 7TSR | X-ray | 1.75 Å | A=1-226 |
| 7TSS | X-ray | 1.75 Å | A=1-226 |
| 7TSU | X-ray | 1.75 Å | A=1-226 |
| 7TSV | X-ray | 1.75 Å | A=1-226 |
Showing 20 of 49 experimental structures (best resolution first).
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