7DTV: Human Calcium-Sensing Receptor

Human Calcium-Sensing Receptor bound with L-Trp and calcium ions. Determined by electron microscopy at 3.5 Å resolution. Released 10 Mar 2021.

Method
Electron microscopy
Resolution
3.5 Å
Organism
Homo sapiens
Chains
2
Atoms
11,276
Mol. weight
251.48 kDa
Ligands
NAG, CA, TRP
Released
10 Mar 2021

Explore 7DTV in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

7DTV contains 74 α-helices and 68 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chains A and B: 37 helices, 34 β-strands

ElementResiduesLengthSheet
β-strand26-2831
β-strand32-3322
β-strand36-3831
β-strand4413
α-helix54-552
α-helix57-593
β-strand6013
α-helix65-8319
β-strand93-9422
β-strand95-9951
α-helix104-11411
α-helix136-1372
β-strand13812
β-strand14114
β-strand142-14321
α-helix150-1534
β-strand164-16634
α-helix173-1753
β-strand183-18534
α-helix193-20311
β-strand209-21465
α-helix220-22910
β-strand237-24375
α-helix249-26012
β-strand266-27055
α-helix277-28610
β-strand292-29545
α-helix308-3103
β-strand32516
α-helix330-3345
α-helix348-3569
α-helix393-3953
β-strand41416
α-helix416-43520
α-helix437-4382
α-helix445-4473
α-helix457-4659
β-strand469-47027
β-strand476-47727
β-strand48414
β-strand48918
β-strand492-49549
α-helix496-4972
β-strand504-50749
β-strand509-51138
β-strand521-52338
β-strand530110
β-strand534110
α-helix537-5393
α-helix544-5463
β-strand550111
β-strand553-554212
β-strand563-564212
β-strand567111
β-strand589-590213
β-strand600-601213
α-helix614-63623
α-helix653-66311
α-helix664-6663
α-helix674-6785
α-helix682-6909
α-helix693-6964
α-helix728-7303
α-helix732-74514
α-helix771-7799
α-helix783-7864
α-helix788-7914
α-helix803-82624
α-helix831-8344
α-helix837-85014
α-helix853-8575

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Extracellular calcium-sensing receptorA, Bprotein1099Homo sapiensP41180 (AlphaFold model)
Sequence of entity 1 (A, B), FASTA
>7DTV_1 Extracellular calcium-sensing receptor (chains A, B)
MKTIIALSYIFCLVFADYKDDDDENLYFQGYGPDQRAQKKGDIILGGLFPIHFGVAAKDQ
DLKSRPESVECIRYNFRGFRWLQAMIFAIEEINSSPALLPNLTLGYRIFDTCNTVSKALE
ATLSFVAQNKIDSLNLDEFCNCSEHIPSTIAVVGATGSGVSTAVANLLGLFYIPQVSYAS
SSRLLSNKNQFKSFLRTIPNDEHQATAMADIIEYFRWNWVGTIAADDDYGRPGIEKFREE
AEERDICIDFSELISQYSDEEEIQHVVEVIQNSTAKVIVVFSSGPDLEPLIKEIVRRNIT
GKIWLASEAWASSSLIAMPQYFHVVGGTIGFALKAGQIPGFREFLKKVHPRKSVHNGFAK
EFWEETFNCHLQEGAKGPLPVDTFLRGHEESGDRFSNSSTAFRPLCTGDENISSVETPYI
DYTHLRISYNVYLAVYSIAHALQDIYTCLPGRGLFTNGSCADIKKVEAWQVLKHLRHLNF
TNNMGEQVTFDECGDLVGNYSIINWHLSPEDGSIVFKEVGYYNVYAKKGERLFINEEKIL
WSGFSREVPFSNCSRDCLAGTRKGIIEGEPTCCFECVECPDGEYSDETDASACNKCPDDF
WSNENHTSCIAKEIEFLSWTEPFGIALTLFAVLGIFLTAFVLGVFIKFRNTPIVKATNRE
LSYLLLFSLLCCFSSSLFFIGEPQDWTCRLRQPAFGISFVLCISCILVKTNRVLLVFEAK
IPTSFHRKWWGLNLQFLLVFLCTFMQIVICVIWLYTAPPSSYRNQELEDEIIFITCHEGS
LMALGFLIGYTCLLAAICFFFAFKSRKLPENFNEAKFITFSMLIFFIVWISFIPAYASTY
GKFVSAVEVIAILAASFGLLACIFFNKIYIILFKPSRNTIEEVRCSTAAHAFKVAARATL
RRSNVSRKRSSSLGGSTGSTPSSSISSKSNSEDPFPQPERQKQQQPLALTQQEQQQQPLT
LPQQQRSQQQPRCKQKVIFGSGTVTFSLSFDEPQKNAMAHRNSTHQNSLEAQKSSDTLTR
HEPLLPLQCGETDLDLTVQETGLQGPVGGDQRPEVEDPEELSPALVVSSSQSFVISGGGS
TVTENVVNSHHHHHHHHHH

Ligands and cofactors

IDNameFormulaCopies
NAG2-acetamido-2-deoxy-beta-D-glucopyranoseC8 H15 N O68
CACalcium ionCa4
TRPTryptophanC11 H12 N2 O22

Primary citation

Structural mechanism of cooperative activation of the human calcium-sensing receptor by Ca 2+ ions and L-tryptophan. Ling, S., Shi, P., Liu, S. et al. Cell Res (2021) 31:383-394. DOI 10.1038/s41422-021-00474-0 · PubMed

Other PDB entries of the same protein (UniProt P41180 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

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