2IIM: SH3 Domain of Human Lck

SH3 Domain of Human Lck. Determined by X-ray diffraction at 1.0 Å resolution. Released 7 Nov 2006.

Method
X-ray diffraction
Resolution
1.0 Å
Organism
Homo sapiens
Chains
1
Atoms
605
Mol. weight
7.19 kDa
Ligands
CA, ZN
Released
7 Nov 2006

Explore 2IIM in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

2IIM contains 1 α-helix and 8 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 1 helix, 8 β-strands

ElementResiduesLengthSheet
β-strand65-6841
β-strand7212
β-strand7911
β-strand8212
β-strand87-9261
β-strand97-10261
β-strand108-11251
α-helix113-1153
β-strand116-11831

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Proto-oncogene tyrosine-protein kinase LCKAprotein62Homo sapiensP06239 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>2IIM_1 Proto-oncogene tyrosine-protein kinase LCK (chains A)
GSPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVA
KA

Ligands and cofactors

IDNameFormulaCopies
CACalcium ionCa1
ZNZinc ionZn1

Water and common crystallization additives (PG4) are not listed.

Primary citation

Crystal structure analysis and solution studies of human Lck-SH3; zinc-induced homodimerization competes with the binding of proline-rich motifs. Romir, J., Lilie, H., Egerer-Sieber, C. et al. J Mol Biol (2007) 365:1417-1428. DOI 10.1016/j.jmb.2006.10.058 · PubMed

Other PDB entries of the same protein (UniProt P06239 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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